Gene : AT3G04300 A. thaliana TAIR10
Defline:  (1 of 2) PTHR33271//PTHR33271:SF3 - FAMILY NOT NAMED // CUPIN DOMAIN-CONTAINING PROTEIN Genomic Order:  373
Name:  ? AT3G04300 Secondary Identifier:  ? PAC:19663347
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G04300 0.5kb upstream 0.5kb upstream 1338 true Chr3: 1139693-1141030 Arabidopsis thaliana
AT3G04300 0.5kb upstream 0.5kb upstream 500 false Chr3: 1139693-1140192 Arabidopsis thaliana
AT3G04300 0.5kb downstream 0.5kb downstream 1338 true Chr3: 1140193-1141530 Arabidopsis thaliana
AT3G04300 0.5kb downstream 0.5kb downstream 500 false Chr3: 1141031-1141530 Arabidopsis thaliana
AT3G04300 1.0kb upstream 1.0kb upstream 1838 true Chr3: 1139193-1141030 Arabidopsis thaliana
AT3G04300 1.0kb upstream 1.0kb upstream 1000 false Chr3: 1139193-1140192 Arabidopsis thaliana
AT3G04300 1.0kb downstream 1.0kb downstream 1838 true Chr3: 1140193-1142030 Arabidopsis thaliana
AT3G04300 1.0kb downstream 1.0kb downstream 1000 false Chr3: 1141031-1142030 Arabidopsis thaliana
AT3G04300 2.0kb upstream 2.0kb upstream 2838 true Chr3: 1138193-1141030 Arabidopsis thaliana
AT3G04300 2.0kb upstream 2.0kb upstream 2000 false Chr3: 1138193-1140192 Arabidopsis thaliana
AT3G04300 2.0kb downstream 2.0kb downstream 2838 true Chr3: 1140193-1143030 Arabidopsis thaliana
AT3G04300 2.0kb downstream 2.0kb downstream 2000 false Chr3: 1141031-1143030 Arabidopsis thaliana
AT3G04300 5.0kb upstream 5.0kb upstream 5838 true Chr3: 1135193-1141030 Arabidopsis thaliana
AT3G04300 5.0kb upstream 5.0kb upstream 5000 false Chr3: 1135193-1140192 Arabidopsis thaliana
AT3G04300 5.0kb downstream 5.0kb downstream 5838 true Chr3: 1140193-1146030 Arabidopsis thaliana
AT3G04300 5.0kb downstream 5.0kb downstream 5000 false Chr3: 1141031-1146030 Arabidopsis thaliana
AT3G04300 10.0kb upstream 10.0kb upstream 10838 true Chr3: 1130193-1141030 Arabidopsis thaliana
AT3G04300 10.0kb upstream 10.0kb upstream 10000 false Chr3: 1130193-1140192 Arabidopsis thaliana
AT3G04300 10.0kb downstream 10.0kb downstream 10838 true Chr3: 1140193-1151030 Arabidopsis thaliana
AT3G04300 10.0kb downstream 10.0kb downstream 10000 false Chr3: 1141031-1151030 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380632 5261 Brassicaceae View MSA
123836451 5264 Brassicales-Malvales View MSA
124349993 5266 SBM View MSA
124240229 5268 Malvidae View MSA
124060878 5270 Rosid View MSA
123742997 5271 Pentapetalae View MSA
122793157 5272 Eudicot View MSA
122044635 5273 Angiosperm View MSA
121350768 5274 Embryophyte View MSA
123425697 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.437        
cufflinks 1.846       High
cufflinks 0.241     Low Low
cufflinks 2.294       High
cufflinks 0.309        
cufflinks 0.865        

0 Strain