Gene : AT3G13227 A. thaliana TAIR10
Defline:  serine-rich protein-related Genomic Order:  1314
Name:  ? AT3G13227 Secondary Identifier:  ? PAC:19659093
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G13227 0.5kb upstream 0.5kb upstream 1000 true Chr3: 4257506-4258505 Arabidopsis thaliana
AT3G13227 0.5kb upstream 0.5kb upstream 500 false Chr3: 4257506-4258005 Arabidopsis thaliana
AT3G13227 0.5kb downstream 0.5kb downstream 1000 true Chr3: 4258006-4259005 Arabidopsis thaliana
AT3G13227 0.5kb downstream 0.5kb downstream 500 false Chr3: 4258506-4259005 Arabidopsis thaliana
AT3G13227 1.0kb upstream 1.0kb upstream 1500 true Chr3: 4257006-4258505 Arabidopsis thaliana
AT3G13227 1.0kb upstream 1.0kb upstream 1000 false Chr3: 4257006-4258005 Arabidopsis thaliana
AT3G13227 1.0kb downstream 1.0kb downstream 1500 true Chr3: 4258006-4259505 Arabidopsis thaliana
AT3G13227 1.0kb downstream 1.0kb downstream 1000 false Chr3: 4258506-4259505 Arabidopsis thaliana
AT3G13227 2.0kb upstream 2.0kb upstream 2500 true Chr3: 4256006-4258505 Arabidopsis thaliana
AT3G13227 2.0kb upstream 2.0kb upstream 2000 false Chr3: 4256006-4258005 Arabidopsis thaliana
AT3G13227 2.0kb downstream 2.0kb downstream 2500 true Chr3: 4258006-4260505 Arabidopsis thaliana
AT3G13227 2.0kb downstream 2.0kb downstream 2000 false Chr3: 4258506-4260505 Arabidopsis thaliana
AT3G13227 5.0kb upstream 5.0kb upstream 5500 true Chr3: 4253006-4258505 Arabidopsis thaliana
AT3G13227 5.0kb upstream 5.0kb upstream 5000 false Chr3: 4253006-4258005 Arabidopsis thaliana
AT3G13227 5.0kb downstream 5.0kb downstream 5500 true Chr3: 4258006-4263505 Arabidopsis thaliana
AT3G13227 5.0kb downstream 5.0kb downstream 5000 false Chr3: 4258506-4263505 Arabidopsis thaliana
AT3G13227 10.0kb upstream 10.0kb upstream 10500 true Chr3: 4248006-4258505 Arabidopsis thaliana
AT3G13227 10.0kb upstream 10.0kb upstream 10000 false Chr3: 4248006-4258005 Arabidopsis thaliana
AT3G13227 10.0kb downstream 10.0kb downstream 10500 true Chr3: 4258006-4268505 Arabidopsis thaliana
AT3G13227 10.0kb downstream 10.0kb downstream 10000 false Chr3: 4258506-4268505 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373565 5261 Brassicaceae View MSA
123840647 5264 Brassicales-Malvales View MSA
124340384 5266 SBM View MSA
124244502 5268 Malvidae View MSA
124070281 5270 Rosid View MSA
123751970 5271 Pentapetalae View MSA
122796079 5272 Eudicot View MSA
122050175 5273 Angiosperm View MSA
121348989 5274 Embryophyte View MSA
123381114 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.027     Low  
cufflinks 0.09     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.031     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.03     Low  

0 Strain