Gene : AT3G13090 A. thaliana TAIR10
Defline:  (1 of 4) PTHR24223:SF181 - ABC TRANSPORTER C FAMILY MEMBER 3-RELATED Genomic Order:  1297
Name:  ? AT3G13090 Secondary Identifier:  ? PAC:19663231
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G13090 0.5kb upstream 0.5kb upstream 5659 true Chr3: 4203013-4208671 Arabidopsis thaliana
AT3G13090 0.5kb upstream 0.5kb upstream 500 false Chr3: 4208172-4208671 Arabidopsis thaliana
AT3G13090 0.5kb downstream 0.5kb downstream 5659 true Chr3: 4202513-4208171 Arabidopsis thaliana
AT3G13090 0.5kb downstream 0.5kb downstream 500 false Chr3: 4202513-4203012 Arabidopsis thaliana
AT3G13090 1.0kb upstream 1.0kb upstream 6159 true Chr3: 4203013-4209171 Arabidopsis thaliana
AT3G13090 1.0kb upstream 1.0kb upstream 1000 false Chr3: 4208172-4209171 Arabidopsis thaliana
AT3G13090 1.0kb downstream 1.0kb downstream 6159 true Chr3: 4202013-4208171 Arabidopsis thaliana
AT3G13090 1.0kb downstream 1.0kb downstream 1000 false Chr3: 4202013-4203012 Arabidopsis thaliana
AT3G13090 2.0kb upstream 2.0kb upstream 7159 true Chr3: 4203013-4210171 Arabidopsis thaliana
AT3G13090 2.0kb upstream 2.0kb upstream 2000 false Chr3: 4208172-4210171 Arabidopsis thaliana
AT3G13090 2.0kb downstream 2.0kb downstream 7159 true Chr3: 4201013-4208171 Arabidopsis thaliana
AT3G13090 2.0kb downstream 2.0kb downstream 2000 false Chr3: 4201013-4203012 Arabidopsis thaliana
AT3G13090 5.0kb upstream 5.0kb upstream 10159 true Chr3: 4203013-4213171 Arabidopsis thaliana
AT3G13090 5.0kb upstream 5.0kb upstream 5000 false Chr3: 4208172-4213171 Arabidopsis thaliana
AT3G13090 5.0kb downstream 5.0kb downstream 10159 true Chr3: 4198013-4208171 Arabidopsis thaliana
AT3G13090 5.0kb downstream 5.0kb downstream 5000 false Chr3: 4198013-4203012 Arabidopsis thaliana
AT3G13090 10.0kb upstream 10.0kb upstream 15159 true Chr3: 4203013-4218171 Arabidopsis thaliana
AT3G13090 10.0kb upstream 10.0kb upstream 10000 false Chr3: 4208172-4218171 Arabidopsis thaliana
AT3G13090 10.0kb downstream 10.0kb downstream 15159 true Chr3: 4193013-4208171 Arabidopsis thaliana
AT3G13090 10.0kb downstream 10.0kb downstream 10000 false Chr3: 4193013-4203012 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380898 5261 Brassicaceae View MSA
123841062 5264 Brassicales-Malvales View MSA
124351483 5266 SBM View MSA
124249805 5268 Malvidae View MSA
124073874 5270 Rosid View MSA
123740561 5271 Pentapetalae View MSA
122793692 5272 Eudicot View MSA
122051642 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121350540 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.414        
cufflinks 0.862        
cufflinks 0.194     Low Low
cufflinks 2.256       High
cufflinks 0.263        
cufflinks 1.959       High

0 Strain