Gene : AT3G13100 A. thaliana TAIR10
Defline:  (1 of 4) PTHR24223:SF181 - ABC TRANSPORTER C FAMILY MEMBER 3-RELATED Genomic Order:  1298
Name:  ? AT3G13100 Secondary Identifier:  ? PAC:19661887
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G13100 0.5kb upstream 0.5kb upstream 5939 true Chr3: 4208735-4214673 Arabidopsis thaliana
AT3G13100 0.5kb upstream 0.5kb upstream 500 false Chr3: 4214174-4214673 Arabidopsis thaliana
AT3G13100 0.5kb downstream 0.5kb downstream 5939 true Chr3: 4208235-4214173 Arabidopsis thaliana
AT3G13100 0.5kb downstream 0.5kb downstream 500 false Chr3: 4208235-4208734 Arabidopsis thaliana
AT3G13100 1.0kb upstream 1.0kb upstream 6439 true Chr3: 4208735-4215173 Arabidopsis thaliana
AT3G13100 1.0kb upstream 1.0kb upstream 1000 false Chr3: 4214174-4215173 Arabidopsis thaliana
AT3G13100 1.0kb downstream 1.0kb downstream 6439 true Chr3: 4207735-4214173 Arabidopsis thaliana
AT3G13100 1.0kb downstream 1.0kb downstream 1000 false Chr3: 4207735-4208734 Arabidopsis thaliana
AT3G13100 2.0kb upstream 2.0kb upstream 7439 true Chr3: 4208735-4216173 Arabidopsis thaliana
AT3G13100 2.0kb upstream 2.0kb upstream 2000 false Chr3: 4214174-4216173 Arabidopsis thaliana
AT3G13100 2.0kb downstream 2.0kb downstream 7439 true Chr3: 4206735-4214173 Arabidopsis thaliana
AT3G13100 2.0kb downstream 2.0kb downstream 2000 false Chr3: 4206735-4208734 Arabidopsis thaliana
AT3G13100 5.0kb upstream 5.0kb upstream 10439 true Chr3: 4208735-4219173 Arabidopsis thaliana
AT3G13100 5.0kb upstream 5.0kb upstream 5000 false Chr3: 4214174-4219173 Arabidopsis thaliana
AT3G13100 5.0kb downstream 5.0kb downstream 10439 true Chr3: 4203735-4214173 Arabidopsis thaliana
AT3G13100 5.0kb downstream 5.0kb downstream 5000 false Chr3: 4203735-4208734 Arabidopsis thaliana
AT3G13100 10.0kb upstream 10.0kb upstream 15439 true Chr3: 4208735-4224173 Arabidopsis thaliana
AT3G13100 10.0kb upstream 10.0kb upstream 10000 false Chr3: 4214174-4224173 Arabidopsis thaliana
AT3G13100 10.0kb downstream 10.0kb downstream 15439 true Chr3: 4198735-4214173 Arabidopsis thaliana
AT3G13100 10.0kb downstream 10.0kb downstream 10000 false Chr3: 4198735-4208734 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380898 5261 Brassicaceae View MSA
123841062 5264 Brassicales-Malvales View MSA
124351483 5266 SBM View MSA
124249805 5268 Malvidae View MSA
124073874 5270 Rosid View MSA
123740561 5271 Pentapetalae View MSA
122793692 5272 Eudicot View MSA
122051642 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121350540 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.29        
cufflinks 2.313        
cufflinks 0.576       Low
cufflinks 4.906       High
cufflinks 0.983        
cufflinks 2.917        

0 Strain