Gene : AT3G12977 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31744:SF5 - NAC DOMAIN-CONTAINING PROTEIN 21/22-RELATED Genomic Order:  1283
Name:  ? AT3G12977 Secondary Identifier:  ? PAC:19660484
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G12977 0.5kb upstream 0.5kb upstream 2742 true Chr3: 4143226-4145967 Arabidopsis thaliana
AT3G12977 0.5kb upstream 0.5kb upstream 500 false Chr3: 4143226-4143725 Arabidopsis thaliana
AT3G12977 0.5kb downstream 0.5kb downstream 2742 true Chr3: 4143726-4146467 Arabidopsis thaliana
AT3G12977 0.5kb downstream 0.5kb downstream 500 false Chr3: 4145968-4146467 Arabidopsis thaliana
AT3G12977 1.0kb upstream 1.0kb upstream 3242 true Chr3: 4142726-4145967 Arabidopsis thaliana
AT3G12977 1.0kb upstream 1.0kb upstream 1000 false Chr3: 4142726-4143725 Arabidopsis thaliana
AT3G12977 1.0kb downstream 1.0kb downstream 3242 true Chr3: 4143726-4146967 Arabidopsis thaliana
AT3G12977 1.0kb downstream 1.0kb downstream 1000 false Chr3: 4145968-4146967 Arabidopsis thaliana
AT3G12977 2.0kb upstream 2.0kb upstream 4242 true Chr3: 4141726-4145967 Arabidopsis thaliana
AT3G12977 2.0kb upstream 2.0kb upstream 2000 false Chr3: 4141726-4143725 Arabidopsis thaliana
AT3G12977 2.0kb downstream 2.0kb downstream 4242 true Chr3: 4143726-4147967 Arabidopsis thaliana
AT3G12977 2.0kb downstream 2.0kb downstream 2000 false Chr3: 4145968-4147967 Arabidopsis thaliana
AT3G12977 5.0kb upstream 5.0kb upstream 7242 true Chr3: 4138726-4145967 Arabidopsis thaliana
AT3G12977 5.0kb upstream 5.0kb upstream 5000 false Chr3: 4138726-4143725 Arabidopsis thaliana
AT3G12977 5.0kb downstream 5.0kb downstream 7242 true Chr3: 4143726-4150967 Arabidopsis thaliana
AT3G12977 5.0kb downstream 5.0kb downstream 5000 false Chr3: 4145968-4150967 Arabidopsis thaliana
AT3G12977 10.0kb upstream 10.0kb upstream 12242 true Chr3: 4133726-4145967 Arabidopsis thaliana
AT3G12977 10.0kb upstream 10.0kb upstream 10000 false Chr3: 4133726-4143725 Arabidopsis thaliana
AT3G12977 10.0kb downstream 10.0kb downstream 12242 true Chr3: 4143726-4155967 Arabidopsis thaliana
AT3G12977 10.0kb downstream 10.0kb downstream 10000 false Chr3: 4145968-4155967 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365303 5261 Brassicaceae View MSA
123841144 5264 Brassicales-Malvales View MSA
124343525 5266 SBM View MSA
124241181 5268 Malvidae View MSA
124060777 5270 Rosid View MSA
123741654 5271 Pentapetalae View MSA
122770099 5272 Eudicot View MSA
122041899 5273 Angiosperm View MSA
121309900 5274 Embryophyte View MSA
123347534 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.05     Low  
cufflinks 0.905        
cufflinks 0.033     Low  
cufflinks 1.13        
cufflinks 0.012     Low Low
cufflinks 1.197        

0 Strain