Gene : AT3G12950 A. thaliana TAIR10
Defline:  Trypsin family protein Genomic Order:  1279
Name:  ? AT3G12950 Secondary Identifier:  ? PAC:19664644
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G12950 0.5kb upstream 0.5kb upstream 3107 true Chr3: 4132528-4135634 Arabidopsis thaliana
AT3G12950 0.5kb upstream 0.5kb upstream 500 false Chr3: 4135135-4135634 Arabidopsis thaliana
AT3G12950 0.5kb downstream 0.5kb downstream 3107 true Chr3: 4132028-4135134 Arabidopsis thaliana
AT3G12950 0.5kb downstream 0.5kb downstream 500 false Chr3: 4132028-4132527 Arabidopsis thaliana
AT3G12950 1.0kb upstream 1.0kb upstream 3607 true Chr3: 4132528-4136134 Arabidopsis thaliana
AT3G12950 1.0kb upstream 1.0kb upstream 1000 false Chr3: 4135135-4136134 Arabidopsis thaliana
AT3G12950 1.0kb downstream 1.0kb downstream 3607 true Chr3: 4131528-4135134 Arabidopsis thaliana
AT3G12950 1.0kb downstream 1.0kb downstream 1000 false Chr3: 4131528-4132527 Arabidopsis thaliana
AT3G12950 2.0kb upstream 2.0kb upstream 4607 true Chr3: 4132528-4137134 Arabidopsis thaliana
AT3G12950 2.0kb upstream 2.0kb upstream 2000 false Chr3: 4135135-4137134 Arabidopsis thaliana
AT3G12950 2.0kb downstream 2.0kb downstream 4607 true Chr3: 4130528-4135134 Arabidopsis thaliana
AT3G12950 2.0kb downstream 2.0kb downstream 2000 false Chr3: 4130528-4132527 Arabidopsis thaliana
AT3G12950 5.0kb upstream 5.0kb upstream 7607 true Chr3: 4132528-4140134 Arabidopsis thaliana
AT3G12950 5.0kb upstream 5.0kb upstream 5000 false Chr3: 4135135-4140134 Arabidopsis thaliana
AT3G12950 5.0kb downstream 5.0kb downstream 7607 true Chr3: 4127528-4135134 Arabidopsis thaliana
AT3G12950 5.0kb downstream 5.0kb downstream 5000 false Chr3: 4127528-4132527 Arabidopsis thaliana
AT3G12950 10.0kb upstream 10.0kb upstream 12607 true Chr3: 4132528-4145134 Arabidopsis thaliana
AT3G12950 10.0kb upstream 10.0kb upstream 10000 false Chr3: 4135135-4145134 Arabidopsis thaliana
AT3G12950 10.0kb downstream 10.0kb downstream 12607 true Chr3: 4122528-4135134 Arabidopsis thaliana
AT3G12950 10.0kb downstream 10.0kb downstream 10000 false Chr3: 4122528-4132527 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363438 5261 Brassicaceae View MSA
123798544 5264 Brassicales-Malvales View MSA
124296168 5266 SBM View MSA
124148399 5268 Malvidae View MSA
123874397 5270 Rosid View MSA
123749544 5271 Pentapetalae View MSA
122793000 5272 Eudicot View MSA
122042486 5273 Angiosperm View MSA
121345558 5274 Embryophyte View MSA
123380236 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.441        
cufflinks 17.404        
cufflinks 10.611       Low
cufflinks 18.422        
cufflinks 11.048       Low
cufflinks 18.309        

0 Strain