Gene : NF-YC11 A. thaliana TAIR10
Primary Identifier:  ? AT3G12480 Defline:  (1 of 1) PTHR10252//PTHR10252:SF40 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED // SUBFAMILY NOT NAMED
Genomic Order:  1227 Name:  ? AT3G12480
Secondary Identifier:  ? PAC:19661185
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G12480 0.5kb upstream 0.5kb upstream 3196 true Chr3: 3957277-3960472 Arabidopsis thaliana
AT3G12480 0.5kb upstream 0.5kb upstream 500 false Chr3: 3957277-3957776 Arabidopsis thaliana
AT3G12480 0.5kb downstream 0.5kb downstream 3196 true Chr3: 3957777-3960972 Arabidopsis thaliana
AT3G12480 0.5kb downstream 0.5kb downstream 500 false Chr3: 3960473-3960972 Arabidopsis thaliana
AT3G12480 1.0kb upstream 1.0kb upstream 3696 true Chr3: 3956777-3960472 Arabidopsis thaliana
AT3G12480 1.0kb upstream 1.0kb upstream 1000 false Chr3: 3956777-3957776 Arabidopsis thaliana
AT3G12480 1.0kb downstream 1.0kb downstream 3696 true Chr3: 3957777-3961472 Arabidopsis thaliana
AT3G12480 1.0kb downstream 1.0kb downstream 1000 false Chr3: 3960473-3961472 Arabidopsis thaliana
AT3G12480 2.0kb upstream 2.0kb upstream 4696 true Chr3: 3955777-3960472 Arabidopsis thaliana
AT3G12480 2.0kb upstream 2.0kb upstream 2000 false Chr3: 3955777-3957776 Arabidopsis thaliana
AT3G12480 2.0kb downstream 2.0kb downstream 4696 true Chr3: 3957777-3962472 Arabidopsis thaliana
AT3G12480 2.0kb downstream 2.0kb downstream 2000 false Chr3: 3960473-3962472 Arabidopsis thaliana
AT3G12480 5.0kb upstream 5.0kb upstream 7696 true Chr3: 3952777-3960472 Arabidopsis thaliana
AT3G12480 5.0kb upstream 5.0kb upstream 5000 false Chr3: 3952777-3957776 Arabidopsis thaliana
AT3G12480 5.0kb downstream 5.0kb downstream 7696 true Chr3: 3957777-3965472 Arabidopsis thaliana
AT3G12480 5.0kb downstream 5.0kb downstream 5000 false Chr3: 3960473-3965472 Arabidopsis thaliana
AT3G12480 10.0kb upstream 10.0kb upstream 12696 true Chr3: 3947777-3960472 Arabidopsis thaliana
AT3G12480 10.0kb upstream 10.0kb upstream 10000 false Chr3: 3947777-3957776 Arabidopsis thaliana
AT3G12480 10.0kb downstream 10.0kb downstream 12696 true Chr3: 3957777-3970472 Arabidopsis thaliana
AT3G12480 10.0kb downstream 10.0kb downstream 10000 false Chr3: 3960473-3970472 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378115 5261 Brassicaceae View MSA
123827798 5264 Brassicales-Malvales View MSA
124346080 5266 SBM View MSA
124244953 5268 Malvidae View MSA
124069286 5270 Rosid View MSA
123742462 5271 Pentapetalae View MSA
122792661 5272 Eudicot View MSA
122049084 5273 Angiosperm View MSA
123429029 5275 Viridiplantae View MSA
121345521 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.58        
cufflinks 11.511       Low
cufflinks 12.785        
cufflinks 13.097        
cufflinks 14.854       High
cufflinks 11.95        

0 Strain