Gene : AT3G12320 A. thaliana TAIR10
Defline:  (1 of 2) PTHR33334:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MQC3 Genomic Order:  1212
Name:  ? AT3G12320 Secondary Identifier:  ? PAC:19659907
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G12320 0.5kb upstream 0.5kb upstream 2231 true Chr3: 3923235-3925465 Arabidopsis thaliana
AT3G12320 0.5kb upstream 0.5kb upstream 500 false Chr3: 3923235-3923734 Arabidopsis thaliana
AT3G12320 0.5kb downstream 0.5kb downstream 2231 true Chr3: 3923735-3925965 Arabidopsis thaliana
AT3G12320 0.5kb downstream 0.5kb downstream 500 false Chr3: 3925466-3925965 Arabidopsis thaliana
AT3G12320 1.0kb upstream 1.0kb upstream 2731 true Chr3: 3922735-3925465 Arabidopsis thaliana
AT3G12320 1.0kb upstream 1.0kb upstream 1000 false Chr3: 3922735-3923734 Arabidopsis thaliana
AT3G12320 1.0kb downstream 1.0kb downstream 2731 true Chr3: 3923735-3926465 Arabidopsis thaliana
AT3G12320 1.0kb downstream 1.0kb downstream 1000 false Chr3: 3925466-3926465 Arabidopsis thaliana
AT3G12320 2.0kb upstream 2.0kb upstream 3731 true Chr3: 3921735-3925465 Arabidopsis thaliana
AT3G12320 2.0kb upstream 2.0kb upstream 2000 false Chr3: 3921735-3923734 Arabidopsis thaliana
AT3G12320 2.0kb downstream 2.0kb downstream 3731 true Chr3: 3923735-3927465 Arabidopsis thaliana
AT3G12320 2.0kb downstream 2.0kb downstream 2000 false Chr3: 3925466-3927465 Arabidopsis thaliana
AT3G12320 5.0kb upstream 5.0kb upstream 6731 true Chr3: 3918735-3925465 Arabidopsis thaliana
AT3G12320 5.0kb upstream 5.0kb upstream 5000 false Chr3: 3918735-3923734 Arabidopsis thaliana
AT3G12320 5.0kb downstream 5.0kb downstream 6731 true Chr3: 3923735-3930465 Arabidopsis thaliana
AT3G12320 5.0kb downstream 5.0kb downstream 5000 false Chr3: 3925466-3930465 Arabidopsis thaliana
AT3G12320 10.0kb upstream 10.0kb upstream 11731 true Chr3: 3913735-3925465 Arabidopsis thaliana
AT3G12320 10.0kb upstream 10.0kb upstream 10000 false Chr3: 3913735-3923734 Arabidopsis thaliana
AT3G12320 10.0kb downstream 10.0kb downstream 11731 true Chr3: 3923735-3935465 Arabidopsis thaliana
AT3G12320 10.0kb downstream 10.0kb downstream 10000 false Chr3: 3925466-3935465 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367859 5261 Brassicaceae View MSA
123840813 5264 Brassicales-Malvales View MSA
124322787 5266 SBM View MSA
124248764 5268 Malvidae View MSA
124070153 5270 Rosid View MSA
123737898 5271 Pentapetalae View MSA
122796234 5272 Eudicot View MSA
122050625 5273 Angiosperm View MSA
121312034 5274 Embryophyte View MSA
123349247 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.123        
cufflinks 1.372        
cufflinks 2.067        
cufflinks 4.526       High
cufflinks 4.284       High
cufflinks 1.138        

0 Strain