Gene : ARP5 A. thaliana TAIR10
Primary Identifier:  ? AT3G12380 Defline:  (1 of 1) K11672 - actin-related protein 5 (ACTR5, ARP5, INO80M)
Genomic Order:  1218 Name:  ? AT3G12380
Secondary Identifier:  ? PAC:19659823
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G12380 0.5kb upstream 0.5kb upstream 4125 true Chr3: 3938276-3942400 Arabidopsis thaliana
AT3G12380 0.5kb upstream 0.5kb upstream 500 false Chr3: 3941901-3942400 Arabidopsis thaliana
AT3G12380 0.5kb downstream 0.5kb downstream 4125 true Chr3: 3937776-3941900 Arabidopsis thaliana
AT3G12380 0.5kb downstream 0.5kb downstream 500 false Chr3: 3937776-3938275 Arabidopsis thaliana
AT3G12380 1.0kb upstream 1.0kb upstream 4625 true Chr3: 3938276-3942900 Arabidopsis thaliana
AT3G12380 1.0kb upstream 1.0kb upstream 1000 false Chr3: 3941901-3942900 Arabidopsis thaliana
AT3G12380 1.0kb downstream 1.0kb downstream 4625 true Chr3: 3937276-3941900 Arabidopsis thaliana
AT3G12380 1.0kb downstream 1.0kb downstream 1000 false Chr3: 3937276-3938275 Arabidopsis thaliana
AT3G12380 2.0kb upstream 2.0kb upstream 5625 true Chr3: 3938276-3943900 Arabidopsis thaliana
AT3G12380 2.0kb upstream 2.0kb upstream 2000 false Chr3: 3941901-3943900 Arabidopsis thaliana
AT3G12380 2.0kb downstream 2.0kb downstream 5625 true Chr3: 3936276-3941900 Arabidopsis thaliana
AT3G12380 2.0kb downstream 2.0kb downstream 2000 false Chr3: 3936276-3938275 Arabidopsis thaliana
AT3G12380 5.0kb upstream 5.0kb upstream 8625 true Chr3: 3938276-3946900 Arabidopsis thaliana
AT3G12380 5.0kb upstream 5.0kb upstream 5000 false Chr3: 3941901-3946900 Arabidopsis thaliana
AT3G12380 5.0kb downstream 5.0kb downstream 8625 true Chr3: 3933276-3941900 Arabidopsis thaliana
AT3G12380 5.0kb downstream 5.0kb downstream 5000 false Chr3: 3933276-3938275 Arabidopsis thaliana
AT3G12380 10.0kb upstream 10.0kb upstream 13625 true Chr3: 3938276-3951900 Arabidopsis thaliana
AT3G12380 10.0kb upstream 10.0kb upstream 10000 false Chr3: 3941901-3951900 Arabidopsis thaliana
AT3G12380 10.0kb downstream 10.0kb downstream 13625 true Chr3: 3928276-3941900 Arabidopsis thaliana
AT3G12380 10.0kb downstream 10.0kb downstream 10000 false Chr3: 3928276-3938275 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026482 5273 Angiosperm View MSA
122368222 5261 Brassicaceae View MSA
123836365 5264 Brassicales-Malvales View MSA
124343086 5266 SBM View MSA
124238533 5268 Malvidae View MSA
124068123 5270 Rosid View MSA
123742695 5271 Pentapetalae View MSA
122791684 5272 Eudicot View MSA
121345083 5274 Embryophyte View MSA
123380152 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.388        
cufflinks 2.89        
cufflinks 1.918       Low
cufflinks 2.994        
cufflinks 1.96       Low
cufflinks 3.12       High

0 Strain