Gene : scpl17 A. thaliana TAIR10
Primary Identifier:  ? AT3G12203 Defline:  (1 of 16) 2.3.1.103 - Sinapoylglucose--sinapoylglucose O-sinapoyltransferase
Genomic Order:  1201 Name:  ? AT3G12203
Secondary Identifier:  ? PAC:19658859
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-3301 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G12203 0.5kb upstream 0.5kb upstream 3125 true Chr3: 3891357-3894481 Arabidopsis thaliana
AT3G12203 0.5kb upstream 0.5kb upstream 500 false Chr3: 3893982-3894481 Arabidopsis thaliana
AT3G12203 0.5kb downstream 0.5kb downstream 3125 true Chr3: 3890857-3893981 Arabidopsis thaliana
AT3G12203 0.5kb downstream 0.5kb downstream 500 false Chr3: 3890857-3891356 Arabidopsis thaliana
AT3G12203 1.0kb upstream 1.0kb upstream 3625 true Chr3: 3891357-3894981 Arabidopsis thaliana
AT3G12203 1.0kb upstream 1.0kb upstream 1000 false Chr3: 3893982-3894981 Arabidopsis thaliana
AT3G12203 1.0kb downstream 1.0kb downstream 3625 true Chr3: 3890357-3893981 Arabidopsis thaliana
AT3G12203 1.0kb downstream 1.0kb downstream 1000 false Chr3: 3890357-3891356 Arabidopsis thaliana
AT3G12203 2.0kb upstream 2.0kb upstream 4625 true Chr3: 3891357-3895981 Arabidopsis thaliana
AT3G12203 2.0kb upstream 2.0kb upstream 2000 false Chr3: 3893982-3895981 Arabidopsis thaliana
AT3G12203 2.0kb downstream 2.0kb downstream 4625 true Chr3: 3889357-3893981 Arabidopsis thaliana
AT3G12203 2.0kb downstream 2.0kb downstream 2000 false Chr3: 3889357-3891356 Arabidopsis thaliana
AT3G12203 5.0kb upstream 5.0kb upstream 7625 true Chr3: 3891357-3898981 Arabidopsis thaliana
AT3G12203 5.0kb upstream 5.0kb upstream 5000 false Chr3: 3893982-3898981 Arabidopsis thaliana
AT3G12203 5.0kb downstream 5.0kb downstream 7625 true Chr3: 3886357-3893981 Arabidopsis thaliana
AT3G12203 5.0kb downstream 5.0kb downstream 5000 false Chr3: 3886357-3891356 Arabidopsis thaliana
AT3G12203 10.0kb upstream 10.0kb upstream 12625 true Chr3: 3891357-3903981 Arabidopsis thaliana
AT3G12203 10.0kb upstream 10.0kb upstream 10000 false Chr3: 3893982-3903981 Arabidopsis thaliana
AT3G12203 10.0kb downstream 10.0kb downstream 12625 true Chr3: 3881357-3893981 Arabidopsis thaliana
AT3G12203 10.0kb downstream 10.0kb downstream 10000 false Chr3: 3881357-3891356 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122344157 5261 Brassicaceae View MSA
123784199 5264 Brassicales-Malvales View MSA
124282396 5266 SBM View MSA
124254219 5268 Malvidae View MSA
124073941 5270 Rosid View MSA
123747460 5271 Pentapetalae View MSA
122796815 5272 Eudicot View MSA
122050629 5273 Angiosperm View MSA
121312037 5274 Embryophyte View MSA
123349249 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.027     Low  
cufflinks 0.017     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.032     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.035     Low  

0 Strain