Gene : AT3G12170 A. thaliana TAIR10
Defline:  (1 of 2) K09529 - DnaJ homolog subfamily C member 9 (DNAJC9) Genomic Order:  1197
Name:  ? AT3G12170 Secondary Identifier:  ? PAC:19662223
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G12170 0.5kb upstream 0.5kb upstream 2305 true Chr3: 3880500-3882804 Arabidopsis thaliana
AT3G12170 0.5kb upstream 0.5kb upstream 500 false Chr3: 3880500-3880999 Arabidopsis thaliana
AT3G12170 0.5kb downstream 0.5kb downstream 2305 true Chr3: 3881000-3883304 Arabidopsis thaliana
AT3G12170 0.5kb downstream 0.5kb downstream 500 false Chr3: 3882805-3883304 Arabidopsis thaliana
AT3G12170 1.0kb upstream 1.0kb upstream 2805 true Chr3: 3880000-3882804 Arabidopsis thaliana
AT3G12170 1.0kb upstream 1.0kb upstream 1000 false Chr3: 3880000-3880999 Arabidopsis thaliana
AT3G12170 1.0kb downstream 1.0kb downstream 2805 true Chr3: 3881000-3883804 Arabidopsis thaliana
AT3G12170 1.0kb downstream 1.0kb downstream 1000 false Chr3: 3882805-3883804 Arabidopsis thaliana
AT3G12170 2.0kb upstream 2.0kb upstream 3805 true Chr3: 3879000-3882804 Arabidopsis thaliana
AT3G12170 2.0kb upstream 2.0kb upstream 2000 false Chr3: 3879000-3880999 Arabidopsis thaliana
AT3G12170 2.0kb downstream 2.0kb downstream 3805 true Chr3: 3881000-3884804 Arabidopsis thaliana
AT3G12170 2.0kb downstream 2.0kb downstream 2000 false Chr3: 3882805-3884804 Arabidopsis thaliana
AT3G12170 5.0kb upstream 5.0kb upstream 6805 true Chr3: 3876000-3882804 Arabidopsis thaliana
AT3G12170 5.0kb upstream 5.0kb upstream 5000 false Chr3: 3876000-3880999 Arabidopsis thaliana
AT3G12170 5.0kb downstream 5.0kb downstream 6805 true Chr3: 3881000-3887804 Arabidopsis thaliana
AT3G12170 5.0kb downstream 5.0kb downstream 5000 false Chr3: 3882805-3887804 Arabidopsis thaliana
AT3G12170 10.0kb upstream 10.0kb upstream 11805 true Chr3: 3871000-3882804 Arabidopsis thaliana
AT3G12170 10.0kb upstream 10.0kb upstream 10000 false Chr3: 3871000-3880999 Arabidopsis thaliana
AT3G12170 10.0kb downstream 10.0kb downstream 11805 true Chr3: 3881000-3892804 Arabidopsis thaliana
AT3G12170 10.0kb downstream 10.0kb downstream 10000 false Chr3: 3882805-3892804 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026181 5273 Angiosperm View MSA
122377310 5261 Brassicaceae View MSA
123837895 5264 Brassicales-Malvales View MSA
124346382 5266 SBM View MSA
124245145 5268 Malvidae View MSA
124061055 5270 Rosid View MSA
123736570 5271 Pentapetalae View MSA
122788654 5272 Eudicot View MSA
121344155 5274 Embryophyte View MSA
123428818 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.212        
cufflinks 2.493        
cufflinks 1.622        
cufflinks 2.274        
cufflinks 1.061       Low
cufflinks 2.549        

0 Strain