Gene : AT3G11760 A. thaliana TAIR10
Defline:  (1 of 1) PTHR31182:SF2 - F26K24.5 PROTEIN Genomic Order:  1152
Name:  ? AT3G11760 Secondary Identifier:  ? PAC:19659389
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G11760 0.5kb upstream 0.5kb upstream 3336 true Chr3: 3717916-3721251 Arabidopsis thaliana
AT3G11760 0.5kb upstream 0.5kb upstream 500 false Chr3: 3717916-3718415 Arabidopsis thaliana
AT3G11760 0.5kb downstream 0.5kb downstream 3336 true Chr3: 3718416-3721751 Arabidopsis thaliana
AT3G11760 0.5kb downstream 0.5kb downstream 500 false Chr3: 3721252-3721751 Arabidopsis thaliana
AT3G11760 1.0kb upstream 1.0kb upstream 3836 true Chr3: 3717416-3721251 Arabidopsis thaliana
AT3G11760 1.0kb upstream 1.0kb upstream 1000 false Chr3: 3717416-3718415 Arabidopsis thaliana
AT3G11760 1.0kb downstream 1.0kb downstream 3836 true Chr3: 3718416-3722251 Arabidopsis thaliana
AT3G11760 1.0kb downstream 1.0kb downstream 1000 false Chr3: 3721252-3722251 Arabidopsis thaliana
AT3G11760 2.0kb upstream 2.0kb upstream 4836 true Chr3: 3716416-3721251 Arabidopsis thaliana
AT3G11760 2.0kb upstream 2.0kb upstream 2000 false Chr3: 3716416-3718415 Arabidopsis thaliana
AT3G11760 2.0kb downstream 2.0kb downstream 4836 true Chr3: 3718416-3723251 Arabidopsis thaliana
AT3G11760 2.0kb downstream 2.0kb downstream 2000 false Chr3: 3721252-3723251 Arabidopsis thaliana
AT3G11760 5.0kb upstream 5.0kb upstream 7836 true Chr3: 3713416-3721251 Arabidopsis thaliana
AT3G11760 5.0kb upstream 5.0kb upstream 5000 false Chr3: 3713416-3718415 Arabidopsis thaliana
AT3G11760 5.0kb downstream 5.0kb downstream 7836 true Chr3: 3718416-3726251 Arabidopsis thaliana
AT3G11760 5.0kb downstream 5.0kb downstream 5000 false Chr3: 3721252-3726251 Arabidopsis thaliana
AT3G11760 10.0kb upstream 10.0kb upstream 12836 true Chr3: 3708416-3721251 Arabidopsis thaliana
AT3G11760 10.0kb upstream 10.0kb upstream 10000 false Chr3: 3708416-3718415 Arabidopsis thaliana
AT3G11760 10.0kb downstream 10.0kb downstream 12836 true Chr3: 3718416-3731251 Arabidopsis thaliana
AT3G11760 10.0kb downstream 10.0kb downstream 10000 false Chr3: 3721252-3731251 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371226 5261 Brassicaceae View MSA
123836506 5264 Brassicales-Malvales View MSA
124340542 5266 SBM View MSA
124253103 5268 Malvidae View MSA
124062767 5270 Rosid View MSA
123743852 5271 Pentapetalae View MSA
122788882 5272 Eudicot View MSA
122044356 5273 Angiosperm View MSA
121348357 5274 Embryophyte View MSA
123380828 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.451        
cufflinks 5.626        
cufflinks 3.65        
cufflinks 6.068       High
cufflinks 2.983       Low
cufflinks 5.525        

0 Strain