Gene : AT3G23270 A. thaliana TAIR10
Defline:  (1 of 2) PTHR22870:SF87 - REGULATOR OF CHROMOSOME CONDENSATION REPEAT-CONTAINING PROTEIN-RELATED Genomic Order:  2442
Name:  ? AT3G23270 Secondary Identifier:  ? PAC:19658775
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G23270 0.5kb upstream 0.5kb upstream 4402 true Chr3: 8315936-8320337 Arabidopsis thaliana
AT3G23270 0.5kb upstream 0.5kb upstream 500 false Chr3: 8315936-8316435 Arabidopsis thaliana
AT3G23270 0.5kb downstream 0.5kb downstream 4402 true Chr3: 8316436-8320837 Arabidopsis thaliana
AT3G23270 0.5kb downstream 0.5kb downstream 500 false Chr3: 8320338-8320837 Arabidopsis thaliana
AT3G23270 1.0kb upstream 1.0kb upstream 4902 true Chr3: 8315436-8320337 Arabidopsis thaliana
AT3G23270 1.0kb upstream 1.0kb upstream 1000 false Chr3: 8315436-8316435 Arabidopsis thaliana
AT3G23270 1.0kb downstream 1.0kb downstream 4902 true Chr3: 8316436-8321337 Arabidopsis thaliana
AT3G23270 1.0kb downstream 1.0kb downstream 1000 false Chr3: 8320338-8321337 Arabidopsis thaliana
AT3G23270 2.0kb upstream 2.0kb upstream 5902 true Chr3: 8314436-8320337 Arabidopsis thaliana
AT3G23270 2.0kb upstream 2.0kb upstream 2000 false Chr3: 8314436-8316435 Arabidopsis thaliana
AT3G23270 2.0kb downstream 2.0kb downstream 5902 true Chr3: 8316436-8322337 Arabidopsis thaliana
AT3G23270 2.0kb downstream 2.0kb downstream 2000 false Chr3: 8320338-8322337 Arabidopsis thaliana
AT3G23270 5.0kb upstream 5.0kb upstream 8902 true Chr3: 8311436-8320337 Arabidopsis thaliana
AT3G23270 5.0kb upstream 5.0kb upstream 5000 false Chr3: 8311436-8316435 Arabidopsis thaliana
AT3G23270 5.0kb downstream 5.0kb downstream 8902 true Chr3: 8316436-8325337 Arabidopsis thaliana
AT3G23270 5.0kb downstream 5.0kb downstream 5000 false Chr3: 8320338-8325337 Arabidopsis thaliana
AT3G23270 10.0kb upstream 10.0kb upstream 13902 true Chr3: 8306436-8320337 Arabidopsis thaliana
AT3G23270 10.0kb upstream 10.0kb upstream 10000 false Chr3: 8306436-8316435 Arabidopsis thaliana
AT3G23270 10.0kb downstream 10.0kb downstream 13902 true Chr3: 8316436-8330337 Arabidopsis thaliana
AT3G23270 10.0kb downstream 10.0kb downstream 10000 false Chr3: 8320338-8330337 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377963 5261 Brassicaceae View MSA
123831510 5264 Brassicales-Malvales View MSA
124341613 5266 SBM View MSA
124242690 5268 Malvidae View MSA
124062740 5270 Rosid View MSA
123737829 5271 Pentapetalae View MSA
122791575 5272 Eudicot View MSA
122049319 5273 Angiosperm View MSA
121311340 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.003     Low  
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.003     Low  
cufflinks 0.02     Low High

0 Strain