Gene : ATFP8 A. thaliana TAIR10
Primary Identifier:  ? AT3G11730 Defline:  (1 of 4) K07874 - Ras-related protein Rab-1A (RAB1A)
Genomic Order:  1148 Name:  ? AT3G11730
Secondary Identifier:  ? PAC:19664422
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G11730 0.5kb upstream 0.5kb upstream 2705 true Chr3: 3709325-3712029 Arabidopsis thaliana
AT3G11730 0.5kb upstream 0.5kb upstream 500 false Chr3: 3711530-3712029 Arabidopsis thaliana
AT3G11730 0.5kb downstream 0.5kb downstream 2705 true Chr3: 3708825-3711529 Arabidopsis thaliana
AT3G11730 0.5kb downstream 0.5kb downstream 500 false Chr3: 3708825-3709324 Arabidopsis thaliana
AT3G11730 1.0kb upstream 1.0kb upstream 3205 true Chr3: 3709325-3712529 Arabidopsis thaliana
AT3G11730 1.0kb upstream 1.0kb upstream 1000 false Chr3: 3711530-3712529 Arabidopsis thaliana
AT3G11730 1.0kb downstream 1.0kb downstream 3205 true Chr3: 3708325-3711529 Arabidopsis thaliana
AT3G11730 1.0kb downstream 1.0kb downstream 1000 false Chr3: 3708325-3709324 Arabidopsis thaliana
AT3G11730 2.0kb upstream 2.0kb upstream 4205 true Chr3: 3709325-3713529 Arabidopsis thaliana
AT3G11730 2.0kb upstream 2.0kb upstream 2000 false Chr3: 3711530-3713529 Arabidopsis thaliana
AT3G11730 2.0kb downstream 2.0kb downstream 4205 true Chr3: 3707325-3711529 Arabidopsis thaliana
AT3G11730 2.0kb downstream 2.0kb downstream 2000 false Chr3: 3707325-3709324 Arabidopsis thaliana
AT3G11730 5.0kb upstream 5.0kb upstream 7205 true Chr3: 3709325-3716529 Arabidopsis thaliana
AT3G11730 5.0kb upstream 5.0kb upstream 5000 false Chr3: 3711530-3716529 Arabidopsis thaliana
AT3G11730 5.0kb downstream 5.0kb downstream 7205 true Chr3: 3704325-3711529 Arabidopsis thaliana
AT3G11730 5.0kb downstream 5.0kb downstream 5000 false Chr3: 3704325-3709324 Arabidopsis thaliana
AT3G11730 10.0kb upstream 10.0kb upstream 12205 true Chr3: 3709325-3721529 Arabidopsis thaliana
AT3G11730 10.0kb upstream 10.0kb upstream 10000 false Chr3: 3711530-3721529 Arabidopsis thaliana
AT3G11730 10.0kb downstream 10.0kb downstream 12205 true Chr3: 3699325-3711529 Arabidopsis thaliana
AT3G11730 10.0kb downstream 10.0kb downstream 10000 false Chr3: 3699325-3709324 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376524 5261 Brassicaceae View MSA
123830544 5264 Brassicales-Malvales View MSA
124321681 5266 SBM View MSA
124243005 5268 Malvidae View MSA
124069076 5270 Rosid View MSA
123751824 5271 Pentapetalae View MSA
122790166 5272 Eudicot View MSA
122051400 5273 Angiosperm View MSA
121350724 5274 Embryophyte View MSA
123381858 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.187       Low
cufflinks 34.434     High High
cufflinks 13.281        
cufflinks 28.928        
cufflinks 15.198        
cufflinks 30.741     High  

0 Strain