Gene : AT3G11800 A. thaliana TAIR10
Genomic Order:  1156 Name:  ? AT3G11800
Secondary Identifier:  ? PAC:19661678
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G11800 0.5kb upstream 0.5kb upstream 2122 true Chr3: 3725608-3727729 Arabidopsis thaliana
AT3G11800 0.5kb upstream 0.5kb upstream 500 false Chr3: 3725608-3726107 Arabidopsis thaliana
AT3G11800 0.5kb downstream 0.5kb downstream 2122 true Chr3: 3726108-3728229 Arabidopsis thaliana
AT3G11800 0.5kb downstream 0.5kb downstream 500 false Chr3: 3727730-3728229 Arabidopsis thaliana
AT3G11800 1.0kb upstream 1.0kb upstream 2622 true Chr3: 3725108-3727729 Arabidopsis thaliana
AT3G11800 1.0kb upstream 1.0kb upstream 1000 false Chr3: 3725108-3726107 Arabidopsis thaliana
AT3G11800 1.0kb downstream 1.0kb downstream 2622 true Chr3: 3726108-3728729 Arabidopsis thaliana
AT3G11800 1.0kb downstream 1.0kb downstream 1000 false Chr3: 3727730-3728729 Arabidopsis thaliana
AT3G11800 2.0kb upstream 2.0kb upstream 3622 true Chr3: 3724108-3727729 Arabidopsis thaliana
AT3G11800 2.0kb upstream 2.0kb upstream 2000 false Chr3: 3724108-3726107 Arabidopsis thaliana
AT3G11800 2.0kb downstream 2.0kb downstream 3622 true Chr3: 3726108-3729729 Arabidopsis thaliana
AT3G11800 2.0kb downstream 2.0kb downstream 2000 false Chr3: 3727730-3729729 Arabidopsis thaliana
AT3G11800 5.0kb upstream 5.0kb upstream 6622 true Chr3: 3721108-3727729 Arabidopsis thaliana
AT3G11800 5.0kb upstream 5.0kb upstream 5000 false Chr3: 3721108-3726107 Arabidopsis thaliana
AT3G11800 5.0kb downstream 5.0kb downstream 6622 true Chr3: 3726108-3732729 Arabidopsis thaliana
AT3G11800 5.0kb downstream 5.0kb downstream 5000 false Chr3: 3727730-3732729 Arabidopsis thaliana
AT3G11800 10.0kb upstream 10.0kb upstream 11622 true Chr3: 3716108-3727729 Arabidopsis thaliana
AT3G11800 10.0kb upstream 10.0kb upstream 10000 false Chr3: 3716108-3726107 Arabidopsis thaliana
AT3G11800 10.0kb downstream 10.0kb downstream 11622 true Chr3: 3726108-3737729 Arabidopsis thaliana
AT3G11800 10.0kb downstream 10.0kb downstream 10000 false Chr3: 3727730-3737729 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372986 5261 Brassicaceae View MSA
123837627 5264 Brassicales-Malvales View MSA
124336735 5266 SBM View MSA
124239663 5268 Malvidae View MSA
124072814 5270 Rosid View MSA
123744407 5271 Pentapetalae View MSA
122795054 5272 Eudicot View MSA
122042892 5273 Angiosperm View MSA
121348150 5274 Embryophyte View MSA
123424463 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.154        
cufflinks 36.516     High  
cufflinks 19.428       Low
cufflinks 35.886     High  
cufflinks 19.877       Low
cufflinks 40.385     High High

0 Strain