Gene : AT3G11560 A. thaliana TAIR10
Defline:  (1 of 2) PTHR14009//PTHR14009:SF9 - LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEIN // LETM1-LIKE PROTEIN Genomic Order:  1131
Name:  ? AT3G11560 Secondary Identifier:  ? PAC:19663789
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G11560 0.5kb upstream 0.5kb upstream 7127 true Chr3: 3638935-3646061 Arabidopsis thaliana
AT3G11560 0.5kb upstream 0.5kb upstream 500 false Chr3: 3638935-3639434 Arabidopsis thaliana
AT3G11560 0.5kb downstream 0.5kb downstream 7127 true Chr3: 3639435-3646561 Arabidopsis thaliana
AT3G11560 0.5kb downstream 0.5kb downstream 500 false Chr3: 3646062-3646561 Arabidopsis thaliana
AT3G11560 1.0kb upstream 1.0kb upstream 7627 true Chr3: 3638435-3646061 Arabidopsis thaliana
AT3G11560 1.0kb upstream 1.0kb upstream 1000 false Chr3: 3638435-3639434 Arabidopsis thaliana
AT3G11560 1.0kb downstream 1.0kb downstream 7627 true Chr3: 3639435-3647061 Arabidopsis thaliana
AT3G11560 1.0kb downstream 1.0kb downstream 1000 false Chr3: 3646062-3647061 Arabidopsis thaliana
AT3G11560 2.0kb upstream 2.0kb upstream 8627 true Chr3: 3637435-3646061 Arabidopsis thaliana
AT3G11560 2.0kb upstream 2.0kb upstream 2000 false Chr3: 3637435-3639434 Arabidopsis thaliana
AT3G11560 2.0kb downstream 2.0kb downstream 8627 true Chr3: 3639435-3648061 Arabidopsis thaliana
AT3G11560 2.0kb downstream 2.0kb downstream 2000 false Chr3: 3646062-3648061 Arabidopsis thaliana
AT3G11560 5.0kb upstream 5.0kb upstream 11627 true Chr3: 3634435-3646061 Arabidopsis thaliana
AT3G11560 5.0kb upstream 5.0kb upstream 5000 false Chr3: 3634435-3639434 Arabidopsis thaliana
AT3G11560 5.0kb downstream 5.0kb downstream 11627 true Chr3: 3639435-3651061 Arabidopsis thaliana
AT3G11560 5.0kb downstream 5.0kb downstream 5000 false Chr3: 3646062-3651061 Arabidopsis thaliana
AT3G11560 10.0kb upstream 10.0kb upstream 16627 true Chr3: 3629435-3646061 Arabidopsis thaliana
AT3G11560 10.0kb upstream 10.0kb upstream 10000 false Chr3: 3629435-3639434 Arabidopsis thaliana
AT3G11560 10.0kb downstream 10.0kb downstream 16627 true Chr3: 3639435-3656061 Arabidopsis thaliana
AT3G11560 10.0kb downstream 10.0kb downstream 10000 false Chr3: 3646062-3656061 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379038 5261 Brassicaceae View MSA
123837098 5264 Brassicales-Malvales View MSA
124338859 5266 SBM View MSA
124237079 5268 Malvidae View MSA
124063652 5270 Rosid View MSA
123740190 5271 Pentapetalae View MSA
122788808 5272 Eudicot View MSA
122047969 5273 Angiosperm View MSA
121348078 5274 Embryophyte View MSA
123380722 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.022        
cufflinks 3.387        
cufflinks 10.004       High
cufflinks 3.426        
cufflinks 9.169        
cufflinks 2.687       Low

0 Strain