Gene : AT3G11420 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10811//PTHR10811:SF14 - FRINGE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1117
Name:  ? AT3G11420 Secondary Identifier:  ? PAC:19660592
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G11420 0.5kb upstream 0.5kb upstream 3596 true Chr3: 3590975-3594570 Arabidopsis thaliana
AT3G11420 0.5kb upstream 0.5kb upstream 500 false Chr3: 3590975-3591474 Arabidopsis thaliana
AT3G11420 0.5kb downstream 0.5kb downstream 3596 true Chr3: 3591475-3595070 Arabidopsis thaliana
AT3G11420 0.5kb downstream 0.5kb downstream 500 false Chr3: 3594571-3595070 Arabidopsis thaliana
AT3G11420 1.0kb upstream 1.0kb upstream 4096 true Chr3: 3590475-3594570 Arabidopsis thaliana
AT3G11420 1.0kb upstream 1.0kb upstream 1000 false Chr3: 3590475-3591474 Arabidopsis thaliana
AT3G11420 1.0kb downstream 1.0kb downstream 4096 true Chr3: 3591475-3595570 Arabidopsis thaliana
AT3G11420 1.0kb downstream 1.0kb downstream 1000 false Chr3: 3594571-3595570 Arabidopsis thaliana
AT3G11420 2.0kb upstream 2.0kb upstream 5096 true Chr3: 3589475-3594570 Arabidopsis thaliana
AT3G11420 2.0kb upstream 2.0kb upstream 2000 false Chr3: 3589475-3591474 Arabidopsis thaliana
AT3G11420 2.0kb downstream 2.0kb downstream 5096 true Chr3: 3591475-3596570 Arabidopsis thaliana
AT3G11420 2.0kb downstream 2.0kb downstream 2000 false Chr3: 3594571-3596570 Arabidopsis thaliana
AT3G11420 5.0kb upstream 5.0kb upstream 8096 true Chr3: 3586475-3594570 Arabidopsis thaliana
AT3G11420 5.0kb upstream 5.0kb upstream 5000 false Chr3: 3586475-3591474 Arabidopsis thaliana
AT3G11420 5.0kb downstream 5.0kb downstream 8096 true Chr3: 3591475-3599570 Arabidopsis thaliana
AT3G11420 5.0kb downstream 5.0kb downstream 5000 false Chr3: 3594571-3599570 Arabidopsis thaliana
AT3G11420 10.0kb upstream 10.0kb upstream 13096 true Chr3: 3581475-3594570 Arabidopsis thaliana
AT3G11420 10.0kb upstream 10.0kb upstream 10000 false Chr3: 3581475-3591474 Arabidopsis thaliana
AT3G11420 10.0kb downstream 10.0kb downstream 13096 true Chr3: 3591475-3604570 Arabidopsis thaliana
AT3G11420 10.0kb downstream 10.0kb downstream 10000 false Chr3: 3594571-3604570 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370849 5261 Brassicaceae View MSA
123829735 5264 Brassicales-Malvales View MSA
124339329 5266 SBM View MSA
124249801 5268 Malvidae View MSA
124070158 5270 Rosid View MSA
123749213 5271 Pentapetalae View MSA
122793908 5272 Eudicot View MSA
122048571 5273 Angiosperm View MSA
121350591 5274 Embryophyte View MSA
123381812 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.9       Low
cufflinks 28.692        
cufflinks 6.722       Low
cufflinks 27.515        
cufflinks 9.123        
cufflinks 28.55        

0 Strain