Gene : AT3G11530 A. thaliana TAIR10
Defline:  (1 of 2) PTHR12050 - LEPTIN RECEPTOR-RELATED Genomic Order:  1128
Name:  ? AT3G11530 Secondary Identifier:  ? PAC:19661525
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G11530 0.5kb upstream 0.5kb upstream 2443 true Chr3: 3628594-3631036 Arabidopsis thaliana
AT3G11530 0.5kb upstream 0.5kb upstream 500 false Chr3: 3630537-3631036 Arabidopsis thaliana
AT3G11530 0.5kb downstream 0.5kb downstream 2443 true Chr3: 3628094-3630536 Arabidopsis thaliana
AT3G11530 0.5kb downstream 0.5kb downstream 500 false Chr3: 3628094-3628593 Arabidopsis thaliana
AT3G11530 1.0kb upstream 1.0kb upstream 2943 true Chr3: 3628594-3631536 Arabidopsis thaliana
AT3G11530 1.0kb upstream 1.0kb upstream 1000 false Chr3: 3630537-3631536 Arabidopsis thaliana
AT3G11530 1.0kb downstream 1.0kb downstream 2943 true Chr3: 3627594-3630536 Arabidopsis thaliana
AT3G11530 1.0kb downstream 1.0kb downstream 1000 false Chr3: 3627594-3628593 Arabidopsis thaliana
AT3G11530 2.0kb upstream 2.0kb upstream 3943 true Chr3: 3628594-3632536 Arabidopsis thaliana
AT3G11530 2.0kb upstream 2.0kb upstream 2000 false Chr3: 3630537-3632536 Arabidopsis thaliana
AT3G11530 2.0kb downstream 2.0kb downstream 3943 true Chr3: 3626594-3630536 Arabidopsis thaliana
AT3G11530 2.0kb downstream 2.0kb downstream 2000 false Chr3: 3626594-3628593 Arabidopsis thaliana
AT3G11530 5.0kb upstream 5.0kb upstream 6943 true Chr3: 3628594-3635536 Arabidopsis thaliana
AT3G11530 5.0kb upstream 5.0kb upstream 5000 false Chr3: 3630537-3635536 Arabidopsis thaliana
AT3G11530 5.0kb downstream 5.0kb downstream 6943 true Chr3: 3623594-3630536 Arabidopsis thaliana
AT3G11530 5.0kb downstream 5.0kb downstream 5000 false Chr3: 3623594-3628593 Arabidopsis thaliana
AT3G11530 10.0kb upstream 10.0kb upstream 11943 true Chr3: 3628594-3640536 Arabidopsis thaliana
AT3G11530 10.0kb upstream 10.0kb upstream 10000 false Chr3: 3630537-3640536 Arabidopsis thaliana
AT3G11530 10.0kb downstream 10.0kb downstream 11943 true Chr3: 3618594-3630536 Arabidopsis thaliana
AT3G11530 10.0kb downstream 10.0kb downstream 10000 false Chr3: 3618594-3628593 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362643 5261 Brassicaceae View MSA
123839525 5264 Brassicales-Malvales View MSA
124350457 5266 SBM View MSA
124238442 5268 Malvidae View MSA
124065379 5270 Rosid View MSA
123747722 5271 Pentapetalae View MSA
122794260 5272 Eudicot View MSA
122045562 5273 Angiosperm View MSA
121348404 5274 Embryophyte View MSA
123428267 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.067        
cufflinks 5.624        
cufflinks 3.566       Low
cufflinks 5.928       High
cufflinks 4.25        
cufflinks 5.326        

0 Strain