Gene : AT3G11340 A. thaliana TAIR10
Defline:  (1 of 4) PTHR11926:SF204 - UDP-GLYCOSYLTRANSFERASE 76C1-RELATED Genomic Order:  1106
Name:  ? AT3G11340 Secondary Identifier:  ? PAC:19662103
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G11340 0.5kb upstream 0.5kb upstream 2065 true Chr3: 3556205-3558269 Arabidopsis thaliana
AT3G11340 0.5kb upstream 0.5kb upstream 500 false Chr3: 3556205-3556704 Arabidopsis thaliana
AT3G11340 0.5kb downstream 0.5kb downstream 2065 true Chr3: 3556705-3558769 Arabidopsis thaliana
AT3G11340 0.5kb downstream 0.5kb downstream 500 false Chr3: 3558270-3558769 Arabidopsis thaliana
AT3G11340 1.0kb upstream 1.0kb upstream 2565 true Chr3: 3555705-3558269 Arabidopsis thaliana
AT3G11340 1.0kb upstream 1.0kb upstream 1000 false Chr3: 3555705-3556704 Arabidopsis thaliana
AT3G11340 1.0kb downstream 1.0kb downstream 2565 true Chr3: 3556705-3559269 Arabidopsis thaliana
AT3G11340 1.0kb downstream 1.0kb downstream 1000 false Chr3: 3558270-3559269 Arabidopsis thaliana
AT3G11340 2.0kb upstream 2.0kb upstream 3565 true Chr3: 3554705-3558269 Arabidopsis thaliana
AT3G11340 2.0kb upstream 2.0kb upstream 2000 false Chr3: 3554705-3556704 Arabidopsis thaliana
AT3G11340 2.0kb downstream 2.0kb downstream 3565 true Chr3: 3556705-3560269 Arabidopsis thaliana
AT3G11340 2.0kb downstream 2.0kb downstream 2000 false Chr3: 3558270-3560269 Arabidopsis thaliana
AT3G11340 5.0kb upstream 5.0kb upstream 6565 true Chr3: 3551705-3558269 Arabidopsis thaliana
AT3G11340 5.0kb upstream 5.0kb upstream 5000 false Chr3: 3551705-3556704 Arabidopsis thaliana
AT3G11340 5.0kb downstream 5.0kb downstream 6565 true Chr3: 3556705-3563269 Arabidopsis thaliana
AT3G11340 5.0kb downstream 5.0kb downstream 5000 false Chr3: 3558270-3563269 Arabidopsis thaliana
AT3G11340 10.0kb upstream 10.0kb upstream 11565 true Chr3: 3546705-3558269 Arabidopsis thaliana
AT3G11340 10.0kb upstream 10.0kb upstream 10000 false Chr3: 3546705-3556704 Arabidopsis thaliana
AT3G11340 10.0kb downstream 10.0kb downstream 11565 true Chr3: 3556705-3568269 Arabidopsis thaliana
AT3G11340 10.0kb downstream 10.0kb downstream 10000 false Chr3: 3558270-3568269 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362619 5261 Brassicaceae View MSA
123831567 5264 Brassicales-Malvales View MSA
124341505 5266 SBM View MSA
124253566 5268 Malvidae View MSA
124072411 5270 Rosid View MSA
123753607 5271 Pentapetalae View MSA
122797779 5272 Eudicot View MSA
122051696 5273 Angiosperm View MSA
121351097 5274 Embryophyte View MSA
123428681 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.651        
cufflinks 4.4        
cufflinks 0.641       Low
cufflinks 17.401       High
cufflinks 2.689        
cufflinks 14.548        

0 Strain