Gene : FAD7 A. thaliana TAIR10
Primary Identifier:  ? AT3G11170 Defline:  (1 of 3) K10257 - omega-3 fatty acid desaturase (delta-15 desaturase) (FAD8, desB)
Genomic Order:  1089 Name:  ? AT3G11170
Secondary Identifier:  ? PAC:19660015
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G11170 0.5kb upstream 0.5kb upstream 3152 true Chr3: 3499301-3502452 Arabidopsis thaliana
AT3G11170 0.5kb upstream 0.5kb upstream 500 false Chr3: 3499301-3499800 Arabidopsis thaliana
AT3G11170 0.5kb downstream 0.5kb downstream 3152 true Chr3: 3499801-3502952 Arabidopsis thaliana
AT3G11170 0.5kb downstream 0.5kb downstream 500 false Chr3: 3502453-3502952 Arabidopsis thaliana
AT3G11170 1.0kb upstream 1.0kb upstream 3652 true Chr3: 3498801-3502452 Arabidopsis thaliana
AT3G11170 1.0kb upstream 1.0kb upstream 1000 false Chr3: 3498801-3499800 Arabidopsis thaliana
AT3G11170 1.0kb downstream 1.0kb downstream 3652 true Chr3: 3499801-3503452 Arabidopsis thaliana
AT3G11170 1.0kb downstream 1.0kb downstream 1000 false Chr3: 3502453-3503452 Arabidopsis thaliana
AT3G11170 2.0kb upstream 2.0kb upstream 4652 true Chr3: 3497801-3502452 Arabidopsis thaliana
AT3G11170 2.0kb upstream 2.0kb upstream 2000 false Chr3: 3497801-3499800 Arabidopsis thaliana
AT3G11170 2.0kb downstream 2.0kb downstream 4652 true Chr3: 3499801-3504452 Arabidopsis thaliana
AT3G11170 2.0kb downstream 2.0kb downstream 2000 false Chr3: 3502453-3504452 Arabidopsis thaliana
AT3G11170 5.0kb upstream 5.0kb upstream 7652 true Chr3: 3494801-3502452 Arabidopsis thaliana
AT3G11170 5.0kb upstream 5.0kb upstream 5000 false Chr3: 3494801-3499800 Arabidopsis thaliana
AT3G11170 5.0kb downstream 5.0kb downstream 7652 true Chr3: 3499801-3507452 Arabidopsis thaliana
AT3G11170 5.0kb downstream 5.0kb downstream 5000 false Chr3: 3502453-3507452 Arabidopsis thaliana
AT3G11170 10.0kb upstream 10.0kb upstream 12652 true Chr3: 3489801-3502452 Arabidopsis thaliana
AT3G11170 10.0kb upstream 10.0kb upstream 10000 false Chr3: 3489801-3499800 Arabidopsis thaliana
AT3G11170 10.0kb downstream 10.0kb downstream 12652 true Chr3: 3499801-3512452 Arabidopsis thaliana
AT3G11170 10.0kb downstream 10.0kb downstream 10000 false Chr3: 3502453-3512452 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367511 5261 Brassicaceae View MSA
123838789 5264 Brassicales-Malvales View MSA
124338417 5266 SBM View MSA
124240620 5268 Malvidae View MSA
124069335 5270 Rosid View MSA
123752062 5271 Pentapetalae View MSA
122788316 5272 Eudicot View MSA
122045494 5273 Angiosperm View MSA
121344489 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 114.441     High High
cufflinks 38.841     High  
cufflinks 97.551     High  
cufflinks 41.808     High  
cufflinks 75.014     High  
cufflinks 40.15     High  

0 Strain