Gene : AT3G10980 A. thaliana TAIR10
Defline:  (1 of 2) PF11204 - Protein of unknown function (DUF2985) (DUF2985) Genomic Order:  1068
Name:  ? AT3G10980 Secondary Identifier:  ? PAC:19661857
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G10980 0.5kb upstream 0.5kb upstream 3032 true Chr3: 3437778-3440809 Arabidopsis thaliana
AT3G10980 0.5kb upstream 0.5kb upstream 500 false Chr3: 3437778-3438277 Arabidopsis thaliana
AT3G10980 0.5kb downstream 0.5kb downstream 3032 true Chr3: 3438278-3441309 Arabidopsis thaliana
AT3G10980 0.5kb downstream 0.5kb downstream 500 false Chr3: 3440810-3441309 Arabidopsis thaliana
AT3G10980 1.0kb upstream 1.0kb upstream 3532 true Chr3: 3437278-3440809 Arabidopsis thaliana
AT3G10980 1.0kb upstream 1.0kb upstream 1000 false Chr3: 3437278-3438277 Arabidopsis thaliana
AT3G10980 1.0kb downstream 1.0kb downstream 3532 true Chr3: 3438278-3441809 Arabidopsis thaliana
AT3G10980 1.0kb downstream 1.0kb downstream 1000 false Chr3: 3440810-3441809 Arabidopsis thaliana
AT3G10980 2.0kb upstream 2.0kb upstream 4532 true Chr3: 3436278-3440809 Arabidopsis thaliana
AT3G10980 2.0kb upstream 2.0kb upstream 2000 false Chr3: 3436278-3438277 Arabidopsis thaliana
AT3G10980 2.0kb downstream 2.0kb downstream 4532 true Chr3: 3438278-3442809 Arabidopsis thaliana
AT3G10980 2.0kb downstream 2.0kb downstream 2000 false Chr3: 3440810-3442809 Arabidopsis thaliana
AT3G10980 5.0kb upstream 5.0kb upstream 7532 true Chr3: 3433278-3440809 Arabidopsis thaliana
AT3G10980 5.0kb upstream 5.0kb upstream 5000 false Chr3: 3433278-3438277 Arabidopsis thaliana
AT3G10980 5.0kb downstream 5.0kb downstream 7532 true Chr3: 3438278-3445809 Arabidopsis thaliana
AT3G10980 5.0kb downstream 5.0kb downstream 5000 false Chr3: 3440810-3445809 Arabidopsis thaliana
AT3G10980 10.0kb upstream 10.0kb upstream 12532 true Chr3: 3428278-3440809 Arabidopsis thaliana
AT3G10980 10.0kb upstream 10.0kb upstream 10000 false Chr3: 3428278-3438277 Arabidopsis thaliana
AT3G10980 10.0kb downstream 10.0kb downstream 12532 true Chr3: 3438278-3450809 Arabidopsis thaliana
AT3G10980 10.0kb downstream 10.0kb downstream 10000 false Chr3: 3440810-3450809 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381538 5261 Brassicaceae View MSA
123834088 5264 Brassicales-Malvales View MSA
124343175 5266 SBM View MSA
124239250 5268 Malvidae View MSA
124061942 5270 Rosid View MSA
123744852 5271 Pentapetalae View MSA
122790012 5272 Eudicot View MSA
122046321 5273 Angiosperm View MSA
121349634 5274 Embryophyte View MSA
123381382 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.219        
cufflinks 15.544        
cufflinks 11.855        
cufflinks 16.693       High
cufflinks 10.9       Low
cufflinks 15.565        

0 Strain