Gene : AT3G10970 A. thaliana TAIR10
Defline:  (1 of 1) PTHR18901:SF29 - HALOACID DEHALOGENASE-LIKE HYDROLASE Genomic Order:  1066
Name:  ? AT3G10970 Secondary Identifier:  ? PAC:19665053
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY66-399 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G10970 0.5kb upstream 0.5kb upstream 3707 true Chr3: 3433073-3436779 Arabidopsis thaliana
AT3G10970 0.5kb upstream 0.5kb upstream 500 false Chr3: 3436280-3436779 Arabidopsis thaliana
AT3G10970 0.5kb downstream 0.5kb downstream 3707 true Chr3: 3432573-3436279 Arabidopsis thaliana
AT3G10970 0.5kb downstream 0.5kb downstream 500 false Chr3: 3432573-3433072 Arabidopsis thaliana
AT3G10970 1.0kb upstream 1.0kb upstream 4207 true Chr3: 3433073-3437279 Arabidopsis thaliana
AT3G10970 1.0kb upstream 1.0kb upstream 1000 false Chr3: 3436280-3437279 Arabidopsis thaliana
AT3G10970 1.0kb downstream 1.0kb downstream 4207 true Chr3: 3432073-3436279 Arabidopsis thaliana
AT3G10970 1.0kb downstream 1.0kb downstream 1000 false Chr3: 3432073-3433072 Arabidopsis thaliana
AT3G10970 2.0kb upstream 2.0kb upstream 5207 true Chr3: 3433073-3438279 Arabidopsis thaliana
AT3G10970 2.0kb upstream 2.0kb upstream 2000 false Chr3: 3436280-3438279 Arabidopsis thaliana
AT3G10970 2.0kb downstream 2.0kb downstream 5207 true Chr3: 3431073-3436279 Arabidopsis thaliana
AT3G10970 2.0kb downstream 2.0kb downstream 2000 false Chr3: 3431073-3433072 Arabidopsis thaliana
AT3G10970 5.0kb upstream 5.0kb upstream 8207 true Chr3: 3433073-3441279 Arabidopsis thaliana
AT3G10970 5.0kb upstream 5.0kb upstream 5000 false Chr3: 3436280-3441279 Arabidopsis thaliana
AT3G10970 5.0kb downstream 5.0kb downstream 8207 true Chr3: 3428073-3436279 Arabidopsis thaliana
AT3G10970 5.0kb downstream 5.0kb downstream 5000 false Chr3: 3428073-3433072 Arabidopsis thaliana
AT3G10970 10.0kb upstream 10.0kb upstream 13207 true Chr3: 3433073-3446279 Arabidopsis thaliana
AT3G10970 10.0kb upstream 10.0kb upstream 10000 false Chr3: 3436280-3446279 Arabidopsis thaliana
AT3G10970 10.0kb downstream 10.0kb downstream 13207 true Chr3: 3423073-3436279 Arabidopsis thaliana
AT3G10970 10.0kb downstream 10.0kb downstream 10000 false Chr3: 3423073-3433072 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369544 5261 Brassicaceae View MSA
123827885 5264 Brassicales-Malvales View MSA
124343178 5266 SBM View MSA
124247546 5268 Malvidae View MSA
124063319 5270 Rosid View MSA
123739364 5271 Pentapetalae View MSA
122791357 5272 Eudicot View MSA
122044656 5273 Angiosperm View MSA
121344215 5274 Embryophyte View MSA
123426092 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.058        
cufflinks 1.382        
cufflinks 8.787        
cufflinks 1.565        
cufflinks 7.597        
cufflinks 1.276       Low

0 Strain