Gene : AT3G23220 A. thaliana TAIR10
Defline:  (1 of 141) PF00847 - AP2 domain (AP2) Genomic Order:  2435
Name:  ? AT3G23220 Secondary Identifier:  ? PAC:19659770
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G23220 0.5kb upstream 0.5kb upstream 939 true Chr3: 8287450-8288388 Arabidopsis thaliana
AT3G23220 0.5kb upstream 0.5kb upstream 500 false Chr3: 8287450-8287949 Arabidopsis thaliana
AT3G23220 0.5kb downstream 0.5kb downstream 939 true Chr3: 8287950-8288888 Arabidopsis thaliana
AT3G23220 0.5kb downstream 0.5kb downstream 500 false Chr3: 8288389-8288888 Arabidopsis thaliana
AT3G23220 1.0kb upstream 1.0kb upstream 1439 true Chr3: 8286950-8288388 Arabidopsis thaliana
AT3G23220 1.0kb upstream 1.0kb upstream 1000 false Chr3: 8286950-8287949 Arabidopsis thaliana
AT3G23220 1.0kb downstream 1.0kb downstream 1439 true Chr3: 8287950-8289388 Arabidopsis thaliana
AT3G23220 1.0kb downstream 1.0kb downstream 1000 false Chr3: 8288389-8289388 Arabidopsis thaliana
AT3G23220 2.0kb upstream 2.0kb upstream 2439 true Chr3: 8285950-8288388 Arabidopsis thaliana
AT3G23220 2.0kb upstream 2.0kb upstream 2000 false Chr3: 8285950-8287949 Arabidopsis thaliana
AT3G23220 2.0kb downstream 2.0kb downstream 2439 true Chr3: 8287950-8290388 Arabidopsis thaliana
AT3G23220 2.0kb downstream 2.0kb downstream 2000 false Chr3: 8288389-8290388 Arabidopsis thaliana
AT3G23220 5.0kb upstream 5.0kb upstream 5439 true Chr3: 8282950-8288388 Arabidopsis thaliana
AT3G23220 5.0kb upstream 5.0kb upstream 5000 false Chr3: 8282950-8287949 Arabidopsis thaliana
AT3G23220 5.0kb downstream 5.0kb downstream 5439 true Chr3: 8287950-8293388 Arabidopsis thaliana
AT3G23220 5.0kb downstream 5.0kb downstream 5000 false Chr3: 8288389-8293388 Arabidopsis thaliana
AT3G23220 10.0kb upstream 10.0kb upstream 10439 true Chr3: 8277950-8288388 Arabidopsis thaliana
AT3G23220 10.0kb upstream 10.0kb upstream 10000 false Chr3: 8277950-8287949 Arabidopsis thaliana
AT3G23220 10.0kb downstream 10.0kb downstream 10439 true Chr3: 8287950-8298388 Arabidopsis thaliana
AT3G23220 10.0kb downstream 10.0kb downstream 10000 false Chr3: 8288389-8298388 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365881 5261 Brassicaceae View MSA
123799057 5264 Brassicales-Malvales View MSA
124349999 5266 SBM View MSA
124254000 5268 Malvidae View MSA
124071371 5270 Rosid View MSA
123752918 5271 Pentapetalae View MSA
122793909 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.412       High
cufflinks 0.13     Low  
cufflinks 0.036     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.113     Low  

0 Strain