Gene : NAC050 A. thaliana TAIR10
Primary Identifier:  ? AT3G10480 Defline:  (1 of 3) PTHR31989:SF29 - F18K10.6 PROTEIN-RELATED
Genomic Order:  1009 Name:  ? AT3G10480
Secondary Identifier:  ? PAC:19662853
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G10480 0.5kb upstream 0.5kb upstream 3243 true Chr3: 3263848-3267090 Arabidopsis thaliana
AT3G10480 0.5kb upstream 0.5kb upstream 500 false Chr3: 3263848-3264347 Arabidopsis thaliana
AT3G10480 0.5kb downstream 0.5kb downstream 3243 true Chr3: 3264348-3267590 Arabidopsis thaliana
AT3G10480 0.5kb downstream 0.5kb downstream 500 false Chr3: 3267091-3267590 Arabidopsis thaliana
AT3G10480 1.0kb upstream 1.0kb upstream 3743 true Chr3: 3263348-3267090 Arabidopsis thaliana
AT3G10480 1.0kb upstream 1.0kb upstream 1000 false Chr3: 3263348-3264347 Arabidopsis thaliana
AT3G10480 1.0kb downstream 1.0kb downstream 3743 true Chr3: 3264348-3268090 Arabidopsis thaliana
AT3G10480 1.0kb downstream 1.0kb downstream 1000 false Chr3: 3267091-3268090 Arabidopsis thaliana
AT3G10480 2.0kb upstream 2.0kb upstream 4743 true Chr3: 3262348-3267090 Arabidopsis thaliana
AT3G10480 2.0kb upstream 2.0kb upstream 2000 false Chr3: 3262348-3264347 Arabidopsis thaliana
AT3G10480 2.0kb downstream 2.0kb downstream 4743 true Chr3: 3264348-3269090 Arabidopsis thaliana
AT3G10480 2.0kb downstream 2.0kb downstream 2000 false Chr3: 3267091-3269090 Arabidopsis thaliana
AT3G10480 5.0kb upstream 5.0kb upstream 7743 true Chr3: 3259348-3267090 Arabidopsis thaliana
AT3G10480 5.0kb upstream 5.0kb upstream 5000 false Chr3: 3259348-3264347 Arabidopsis thaliana
AT3G10480 5.0kb downstream 5.0kb downstream 7743 true Chr3: 3264348-3272090 Arabidopsis thaliana
AT3G10480 5.0kb downstream 5.0kb downstream 5000 false Chr3: 3267091-3272090 Arabidopsis thaliana
AT3G10480 10.0kb upstream 10.0kb upstream 12743 true Chr3: 3254348-3267090 Arabidopsis thaliana
AT3G10480 10.0kb upstream 10.0kb upstream 10000 false Chr3: 3254348-3264347 Arabidopsis thaliana
AT3G10480 10.0kb downstream 10.0kb downstream 12743 true Chr3: 3264348-3277090 Arabidopsis thaliana
AT3G10480 10.0kb downstream 10.0kb downstream 10000 false Chr3: 3267091-3277090 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122330105 5261 Brassicaceae Singleton cluster - no MSA
123771374 5264 Brassicales-Malvales Singleton cluster - no MSA
124269904 5266 SBM Singleton cluster - no MSA
124251197 5268 Malvidae View MSA
124061074 5270 Rosid View MSA
123751964 5271 Pentapetalae View MSA
122797283 5272 Eudicot View MSA
122049961 5273 Angiosperm View MSA
121350430 5274 Embryophyte View MSA
123381726 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.565       Low
cufflinks 3.983       High
cufflinks 2.752        
cufflinks 3.75        
cufflinks 3.074        
cufflinks 3.665        

0 Strain