Gene : AT3G10060 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10516:SF323 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-4, CHLOROPLASTIC Genomic Order:  963
Name:  ? AT3G10060 Secondary Identifier:  ? PAC:19661035
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G10060 0.5kb upstream 0.5kb upstream 2358 true Chr3: 3101657-3104014 Arabidopsis thaliana
AT3G10060 0.5kb upstream 0.5kb upstream 500 false Chr3: 3101657-3102156 Arabidopsis thaliana
AT3G10060 0.5kb downstream 0.5kb downstream 2358 true Chr3: 3102157-3104514 Arabidopsis thaliana
AT3G10060 0.5kb downstream 0.5kb downstream 500 false Chr3: 3104015-3104514 Arabidopsis thaliana
AT3G10060 1.0kb upstream 1.0kb upstream 2858 true Chr3: 3101157-3104014 Arabidopsis thaliana
AT3G10060 1.0kb upstream 1.0kb upstream 1000 false Chr3: 3101157-3102156 Arabidopsis thaliana
AT3G10060 1.0kb downstream 1.0kb downstream 2858 true Chr3: 3102157-3105014 Arabidopsis thaliana
AT3G10060 1.0kb downstream 1.0kb downstream 1000 false Chr3: 3104015-3105014 Arabidopsis thaliana
AT3G10060 2.0kb upstream 2.0kb upstream 3858 true Chr3: 3100157-3104014 Arabidopsis thaliana
AT3G10060 2.0kb upstream 2.0kb upstream 2000 false Chr3: 3100157-3102156 Arabidopsis thaliana
AT3G10060 2.0kb downstream 2.0kb downstream 3858 true Chr3: 3102157-3106014 Arabidopsis thaliana
AT3G10060 2.0kb downstream 2.0kb downstream 2000 false Chr3: 3104015-3106014 Arabidopsis thaliana
AT3G10060 5.0kb upstream 5.0kb upstream 6858 true Chr3: 3097157-3104014 Arabidopsis thaliana
AT3G10060 5.0kb upstream 5.0kb upstream 5000 false Chr3: 3097157-3102156 Arabidopsis thaliana
AT3G10060 5.0kb downstream 5.0kb downstream 6858 true Chr3: 3102157-3109014 Arabidopsis thaliana
AT3G10060 5.0kb downstream 5.0kb downstream 5000 false Chr3: 3104015-3109014 Arabidopsis thaliana
AT3G10060 10.0kb upstream 10.0kb upstream 11858 true Chr3: 3092157-3104014 Arabidopsis thaliana
AT3G10060 10.0kb upstream 10.0kb upstream 10000 false Chr3: 3092157-3102156 Arabidopsis thaliana
AT3G10060 10.0kb downstream 10.0kb downstream 11858 true Chr3: 3102157-3114014 Arabidopsis thaliana
AT3G10060 10.0kb downstream 10.0kb downstream 10000 false Chr3: 3104015-3114014 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363764 5261 Brassicaceae View MSA
123833940 5264 Brassicales-Malvales View MSA
124340496 5266 SBM View MSA
124243766 5268 Malvidae View MSA
124067808 5270 Rosid View MSA
123739140 5271 Pentapetalae View MSA
122789715 5272 Eudicot View MSA
122047371 5273 Angiosperm View MSA
121347263 5274 Embryophyte View MSA
123426566 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 40.383     High  
cufflinks 1.184        
cufflinks 43.247     High  
cufflinks 1.489        
cufflinks 37.987     High  
cufflinks 1.009       Low

0 Strain