Gene : EDA31 A. thaliana TAIR10
Primary Identifier:  ? AT3G10000 Defline:  (1 of 2) PTHR21654//PTHR21654:SF5 - FAMILY NOT NAMED // TRIHELIX TRANSCRIPTION FACTOR PTL
Genomic Order:  957 Name:  ? AT3G10000
Secondary Identifier:  ? PAC:19662363
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G10000 0.5kb upstream 0.5kb upstream 2667 true Chr3: 3076281-3078947 Arabidopsis thaliana
AT3G10000 0.5kb upstream 0.5kb upstream 500 false Chr3: 3076281-3076780 Arabidopsis thaliana
AT3G10000 0.5kb downstream 0.5kb downstream 2667 true Chr3: 3076781-3079447 Arabidopsis thaliana
AT3G10000 0.5kb downstream 0.5kb downstream 500 false Chr3: 3078948-3079447 Arabidopsis thaliana
AT3G10000 1.0kb upstream 1.0kb upstream 3167 true Chr3: 3075781-3078947 Arabidopsis thaliana
AT3G10000 1.0kb upstream 1.0kb upstream 1000 false Chr3: 3075781-3076780 Arabidopsis thaliana
AT3G10000 1.0kb downstream 1.0kb downstream 3167 true Chr3: 3076781-3079947 Arabidopsis thaliana
AT3G10000 1.0kb downstream 1.0kb downstream 1000 false Chr3: 3078948-3079947 Arabidopsis thaliana
AT3G10000 2.0kb upstream 2.0kb upstream 4167 true Chr3: 3074781-3078947 Arabidopsis thaliana
AT3G10000 2.0kb upstream 2.0kb upstream 2000 false Chr3: 3074781-3076780 Arabidopsis thaliana
AT3G10000 2.0kb downstream 2.0kb downstream 4167 true Chr3: 3076781-3080947 Arabidopsis thaliana
AT3G10000 2.0kb downstream 2.0kb downstream 2000 false Chr3: 3078948-3080947 Arabidopsis thaliana
AT3G10000 5.0kb upstream 5.0kb upstream 7167 true Chr3: 3071781-3078947 Arabidopsis thaliana
AT3G10000 5.0kb upstream 5.0kb upstream 5000 false Chr3: 3071781-3076780 Arabidopsis thaliana
AT3G10000 5.0kb downstream 5.0kb downstream 7167 true Chr3: 3076781-3083947 Arabidopsis thaliana
AT3G10000 5.0kb downstream 5.0kb downstream 5000 false Chr3: 3078948-3083947 Arabidopsis thaliana
AT3G10000 10.0kb upstream 10.0kb upstream 12167 true Chr3: 3066781-3078947 Arabidopsis thaliana
AT3G10000 10.0kb upstream 10.0kb upstream 10000 false Chr3: 3066781-3076780 Arabidopsis thaliana
AT3G10000 10.0kb downstream 10.0kb downstream 12167 true Chr3: 3076781-3088947 Arabidopsis thaliana
AT3G10000 10.0kb downstream 10.0kb downstream 10000 false Chr3: 3078948-3088947 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121502583 5273 Angiosperm View MSA
122343100 5261 Brassicaceae View MSA
123783399 5264 Brassicales-Malvales View MSA
124281634 5266 SBM View MSA
124136358 5268 Malvidae View MSA
123864232 5270 Rosid View MSA
123449565 5271 Pentapetalae View MSA
122485097 5272 Eudicot View MSA
120775893 5274 Embryophyte View MSA
122818184 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.117     Low High
cufflinks 0.007     Low Low
cufflinks 0.046     Low  
cufflinks 0.009     Low  
cufflinks 0.045     Low  
cufflinks 0.019     Low  

0 Strain