Gene : OMR1 A. thaliana TAIR10
Primary Identifier:  ? AT3G10050 Defline:  (1 of 1) 4.3.1.19 - Threonine ammonia-lyase / Threonine dehydratase
Genomic Order:  962 Name:  ? AT3G10050
Secondary Identifier:  ? PAC:19660091
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana BRANCHED-CHAIN-AA-SYN-PWY Arabidopsis thaliana pathologic  
Athaliana ILEUSYN-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-3001 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G10050 0.5kb upstream 0.5kb upstream 3537 true Chr3: 3098725-3102261 Arabidopsis thaliana
AT3G10050 0.5kb upstream 0.5kb upstream 500 false Chr3: 3101762-3102261 Arabidopsis thaliana
AT3G10050 0.5kb downstream 0.5kb downstream 3537 true Chr3: 3098225-3101761 Arabidopsis thaliana
AT3G10050 0.5kb downstream 0.5kb downstream 500 false Chr3: 3098225-3098724 Arabidopsis thaliana
AT3G10050 1.0kb upstream 1.0kb upstream 4037 true Chr3: 3098725-3102761 Arabidopsis thaliana
AT3G10050 1.0kb upstream 1.0kb upstream 1000 false Chr3: 3101762-3102761 Arabidopsis thaliana
AT3G10050 1.0kb downstream 1.0kb downstream 4037 true Chr3: 3097725-3101761 Arabidopsis thaliana
AT3G10050 1.0kb downstream 1.0kb downstream 1000 false Chr3: 3097725-3098724 Arabidopsis thaliana
AT3G10050 2.0kb upstream 2.0kb upstream 5037 true Chr3: 3098725-3103761 Arabidopsis thaliana
AT3G10050 2.0kb upstream 2.0kb upstream 2000 false Chr3: 3101762-3103761 Arabidopsis thaliana
AT3G10050 2.0kb downstream 2.0kb downstream 5037 true Chr3: 3096725-3101761 Arabidopsis thaliana
AT3G10050 2.0kb downstream 2.0kb downstream 2000 false Chr3: 3096725-3098724 Arabidopsis thaliana
AT3G10050 5.0kb upstream 5.0kb upstream 8037 true Chr3: 3098725-3106761 Arabidopsis thaliana
AT3G10050 5.0kb upstream 5.0kb upstream 5000 false Chr3: 3101762-3106761 Arabidopsis thaliana
AT3G10050 5.0kb downstream 5.0kb downstream 8037 true Chr3: 3093725-3101761 Arabidopsis thaliana
AT3G10050 5.0kb downstream 5.0kb downstream 5000 false Chr3: 3093725-3098724 Arabidopsis thaliana
AT3G10050 10.0kb upstream 10.0kb upstream 13037 true Chr3: 3098725-3111761 Arabidopsis thaliana
AT3G10050 10.0kb upstream 10.0kb upstream 10000 false Chr3: 3101762-3111761 Arabidopsis thaliana
AT3G10050 10.0kb downstream 10.0kb downstream 13037 true Chr3: 3088725-3101761 Arabidopsis thaliana
AT3G10050 10.0kb downstream 10.0kb downstream 10000 false Chr3: 3088725-3098724 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040897 5273 Angiosperm View MSA
122377421 5261 Brassicaceae View MSA
123831169 5264 Brassicales-Malvales View MSA
124337828 5266 SBM View MSA
124240425 5268 Malvidae View MSA
124062087 5270 Rosid View MSA
123737037 5271 Pentapetalae View MSA
122787691 5272 Eudicot View MSA
121344792 5274 Embryophyte View MSA
123427671 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.77       Low
cufflinks 14.752        
cufflinks 15.325        
cufflinks 16.335        
cufflinks 16.19        
cufflinks 15.362        

0 Strain