Gene : AT3G09670 A. thaliana TAIR10
Defline:  (1 of 2) PTHR22981:SF71 - PWWP DOMAIN-CONTAINING PROTEIN Genomic Order:  919
Name:  ? AT3G09670 Secondary Identifier:  ? PAC:19664393
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G09670 0.5kb upstream 0.5kb upstream 3098 true Chr3: 2965875-2968972 Arabidopsis thaliana
AT3G09670 0.5kb upstream 0.5kb upstream 500 false Chr3: 2965875-2966374 Arabidopsis thaliana
AT3G09670 0.5kb downstream 0.5kb downstream 3098 true Chr3: 2966375-2969472 Arabidopsis thaliana
AT3G09670 0.5kb downstream 0.5kb downstream 500 false Chr3: 2968973-2969472 Arabidopsis thaliana
AT3G09670 1.0kb upstream 1.0kb upstream 3598 true Chr3: 2965375-2968972 Arabidopsis thaliana
AT3G09670 1.0kb upstream 1.0kb upstream 1000 false Chr3: 2965375-2966374 Arabidopsis thaliana
AT3G09670 1.0kb downstream 1.0kb downstream 3598 true Chr3: 2966375-2969972 Arabidopsis thaliana
AT3G09670 1.0kb downstream 1.0kb downstream 1000 false Chr3: 2968973-2969972 Arabidopsis thaliana
AT3G09670 2.0kb upstream 2.0kb upstream 4598 true Chr3: 2964375-2968972 Arabidopsis thaliana
AT3G09670 2.0kb upstream 2.0kb upstream 2000 false Chr3: 2964375-2966374 Arabidopsis thaliana
AT3G09670 2.0kb downstream 2.0kb downstream 4598 true Chr3: 2966375-2970972 Arabidopsis thaliana
AT3G09670 2.0kb downstream 2.0kb downstream 2000 false Chr3: 2968973-2970972 Arabidopsis thaliana
AT3G09670 5.0kb upstream 5.0kb upstream 7598 true Chr3: 2961375-2968972 Arabidopsis thaliana
AT3G09670 5.0kb upstream 5.0kb upstream 5000 false Chr3: 2961375-2966374 Arabidopsis thaliana
AT3G09670 5.0kb downstream 5.0kb downstream 7598 true Chr3: 2966375-2973972 Arabidopsis thaliana
AT3G09670 5.0kb downstream 5.0kb downstream 5000 false Chr3: 2968973-2973972 Arabidopsis thaliana
AT3G09670 10.0kb upstream 10.0kb upstream 12598 true Chr3: 2956375-2968972 Arabidopsis thaliana
AT3G09670 10.0kb upstream 10.0kb upstream 10000 false Chr3: 2956375-2966374 Arabidopsis thaliana
AT3G09670 10.0kb downstream 10.0kb downstream 12598 true Chr3: 2966375-2978972 Arabidopsis thaliana
AT3G09670 10.0kb downstream 10.0kb downstream 10000 false Chr3: 2968973-2978972 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343245 5261 Brassicaceae View MSA
123783501 5264 Brassicales-Malvales View MSA
124281731 5266 SBM View MSA
124251162 5268 Malvidae View MSA
124071985 5270 Rosid View MSA
123749922 5271 Pentapetalae View MSA
122795074 5272 Eudicot View MSA
122049561 5273 Angiosperm View MSA
121311475 5274 Embryophyte View MSA
123348768 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.395        
cufflinks 1.948        
cufflinks 1.93        
cufflinks 2.511       High
cufflinks 1.817       Low
cufflinks 2.297        

0 Strain