Gene : APX2 A. thaliana TAIR10
Primary Identifier:  ? AT3G09640 Defline:  (1 of 2) PTHR31356:SF10 - L-ASCORBATE PEROXIDASE 2, CYTOSOLIC
Genomic Order:  916 Name:  ? AT3G09640
Secondary Identifier:  ? PAC:19660573
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-2261 Arabidopsis thaliana pathologic  
Athaliana PWY-6959 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G09640 0.5kb upstream 0.5kb upstream 2672 true Chr3: 2955656-2958327 Arabidopsis thaliana
AT3G09640 0.5kb upstream 0.5kb upstream 500 false Chr3: 2955656-2956155 Arabidopsis thaliana
AT3G09640 0.5kb downstream 0.5kb downstream 2672 true Chr3: 2956156-2958827 Arabidopsis thaliana
AT3G09640 0.5kb downstream 0.5kb downstream 500 false Chr3: 2958328-2958827 Arabidopsis thaliana
AT3G09640 1.0kb upstream 1.0kb upstream 3172 true Chr3: 2955156-2958327 Arabidopsis thaliana
AT3G09640 1.0kb upstream 1.0kb upstream 1000 false Chr3: 2955156-2956155 Arabidopsis thaliana
AT3G09640 1.0kb downstream 1.0kb downstream 3172 true Chr3: 2956156-2959327 Arabidopsis thaliana
AT3G09640 1.0kb downstream 1.0kb downstream 1000 false Chr3: 2958328-2959327 Arabidopsis thaliana
AT3G09640 2.0kb upstream 2.0kb upstream 4172 true Chr3: 2954156-2958327 Arabidopsis thaliana
AT3G09640 2.0kb upstream 2.0kb upstream 2000 false Chr3: 2954156-2956155 Arabidopsis thaliana
AT3G09640 2.0kb downstream 2.0kb downstream 4172 true Chr3: 2956156-2960327 Arabidopsis thaliana
AT3G09640 2.0kb downstream 2.0kb downstream 2000 false Chr3: 2958328-2960327 Arabidopsis thaliana
AT3G09640 5.0kb upstream 5.0kb upstream 7172 true Chr3: 2951156-2958327 Arabidopsis thaliana
AT3G09640 5.0kb upstream 5.0kb upstream 5000 false Chr3: 2951156-2956155 Arabidopsis thaliana
AT3G09640 5.0kb downstream 5.0kb downstream 7172 true Chr3: 2956156-2963327 Arabidopsis thaliana
AT3G09640 5.0kb downstream 5.0kb downstream 5000 false Chr3: 2958328-2963327 Arabidopsis thaliana
AT3G09640 10.0kb upstream 10.0kb upstream 12172 true Chr3: 2946156-2958327 Arabidopsis thaliana
AT3G09640 10.0kb upstream 10.0kb upstream 10000 false Chr3: 2946156-2956155 Arabidopsis thaliana
AT3G09640 10.0kb downstream 10.0kb downstream 12172 true Chr3: 2956156-2968327 Arabidopsis thaliana
AT3G09640 10.0kb downstream 10.0kb downstream 10000 false Chr3: 2958328-2968327 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372503 5261 Brassicaceae View MSA
123833183 5264 Brassicales-Malvales View MSA
124345935 5266 SBM View MSA
124248895 5268 Malvidae View MSA
124068994 5270 Rosid View MSA
123741454 5271 Pentapetalae View MSA
122796920 5272 Eudicot View MSA
122044564 5273 Angiosperm View MSA
121344996 5274 Embryophyte View MSA
123426233 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.035     Low High
cufflinks 0.004     Low  
cufflinks 0.004     Low  
cufflinks 0.006     Low  
cufflinks 0.008     Low  

0 Strain