Gene : AT3G09680 A. thaliana TAIR10
Defline:  (1 of 2) K02973 - small subunit ribosomal protein S23e (RP-S23e, RPS23) Genomic Order:  920
Name:  ? AT3G09680 Secondary Identifier:  ? PAC:19658413
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G09680 0.5kb upstream 0.5kb upstream 1827 true Chr3: 2969045-2970871 Arabidopsis thaliana
AT3G09680 0.5kb upstream 0.5kb upstream 500 false Chr3: 2970372-2970871 Arabidopsis thaliana
AT3G09680 0.5kb downstream 0.5kb downstream 1827 true Chr3: 2968545-2970371 Arabidopsis thaliana
AT3G09680 0.5kb downstream 0.5kb downstream 500 false Chr3: 2968545-2969044 Arabidopsis thaliana
AT3G09680 1.0kb upstream 1.0kb upstream 2327 true Chr3: 2969045-2971371 Arabidopsis thaliana
AT3G09680 1.0kb upstream 1.0kb upstream 1000 false Chr3: 2970372-2971371 Arabidopsis thaliana
AT3G09680 1.0kb downstream 1.0kb downstream 2327 true Chr3: 2968045-2970371 Arabidopsis thaliana
AT3G09680 1.0kb downstream 1.0kb downstream 1000 false Chr3: 2968045-2969044 Arabidopsis thaliana
AT3G09680 2.0kb upstream 2.0kb upstream 3327 true Chr3: 2969045-2972371 Arabidopsis thaliana
AT3G09680 2.0kb upstream 2.0kb upstream 2000 false Chr3: 2970372-2972371 Arabidopsis thaliana
AT3G09680 2.0kb downstream 2.0kb downstream 3327 true Chr3: 2967045-2970371 Arabidopsis thaliana
AT3G09680 2.0kb downstream 2.0kb downstream 2000 false Chr3: 2967045-2969044 Arabidopsis thaliana
AT3G09680 5.0kb upstream 5.0kb upstream 6327 true Chr3: 2969045-2975371 Arabidopsis thaliana
AT3G09680 5.0kb upstream 5.0kb upstream 5000 false Chr3: 2970372-2975371 Arabidopsis thaliana
AT3G09680 5.0kb downstream 5.0kb downstream 6327 true Chr3: 2964045-2970371 Arabidopsis thaliana
AT3G09680 5.0kb downstream 5.0kb downstream 5000 false Chr3: 2964045-2969044 Arabidopsis thaliana
AT3G09680 10.0kb upstream 10.0kb upstream 11327 true Chr3: 2969045-2980371 Arabidopsis thaliana
AT3G09680 10.0kb upstream 10.0kb upstream 10000 false Chr3: 2970372-2980371 Arabidopsis thaliana
AT3G09680 10.0kb downstream 10.0kb downstream 11327 true Chr3: 2959045-2970371 Arabidopsis thaliana
AT3G09680 10.0kb downstream 10.0kb downstream 10000 false Chr3: 2959045-2969044 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782747 5273 Angiosperm View MSA
122332199 5261 Brassicaceae View MSA
123773294 5264 Brassicales-Malvales View MSA
124271786 5266 SBM View MSA
124127741 5268 Malvidae View MSA
123856558 5270 Rosid View MSA
123753818 5271 Pentapetalae View MSA
122775258 5272 Eudicot View MSA
121351781 5274 Embryophyte View MSA
123382324 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.663       Low
cufflinks 1.364        
cufflinks 0.796        
cufflinks 1.376        
cufflinks 0.878        
cufflinks 1.509       High

0 Strain