Gene : AT3G09200 A. thaliana TAIR10
Defline:  (1 of 3) K02941 - large subunit ribosomal protein LP0 (RP-LP0, RPLP0) Genomic Order:  874
Name:  ? AT3G09200 Secondary Identifier:  ? PAC:19659168
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G09200 0.5kb upstream 0.5kb upstream 2525 true Chr3: 2823090-2825614 Arabidopsis thaliana
AT3G09200 0.5kb upstream 0.5kb upstream 500 false Chr3: 2825115-2825614 Arabidopsis thaliana
AT3G09200 0.5kb downstream 0.5kb downstream 2525 true Chr3: 2822590-2825114 Arabidopsis thaliana
AT3G09200 0.5kb downstream 0.5kb downstream 500 false Chr3: 2822590-2823089 Arabidopsis thaliana
AT3G09200 1.0kb upstream 1.0kb upstream 3025 true Chr3: 2823090-2826114 Arabidopsis thaliana
AT3G09200 1.0kb upstream 1.0kb upstream 1000 false Chr3: 2825115-2826114 Arabidopsis thaliana
AT3G09200 1.0kb downstream 1.0kb downstream 3025 true Chr3: 2822090-2825114 Arabidopsis thaliana
AT3G09200 1.0kb downstream 1.0kb downstream 1000 false Chr3: 2822090-2823089 Arabidopsis thaliana
AT3G09200 2.0kb upstream 2.0kb upstream 4025 true Chr3: 2823090-2827114 Arabidopsis thaliana
AT3G09200 2.0kb upstream 2.0kb upstream 2000 false Chr3: 2825115-2827114 Arabidopsis thaliana
AT3G09200 2.0kb downstream 2.0kb downstream 4025 true Chr3: 2821090-2825114 Arabidopsis thaliana
AT3G09200 2.0kb downstream 2.0kb downstream 2000 false Chr3: 2821090-2823089 Arabidopsis thaliana
AT3G09200 5.0kb upstream 5.0kb upstream 7025 true Chr3: 2823090-2830114 Arabidopsis thaliana
AT3G09200 5.0kb upstream 5.0kb upstream 5000 false Chr3: 2825115-2830114 Arabidopsis thaliana
AT3G09200 5.0kb downstream 5.0kb downstream 7025 true Chr3: 2818090-2825114 Arabidopsis thaliana
AT3G09200 5.0kb downstream 5.0kb downstream 5000 false Chr3: 2818090-2823089 Arabidopsis thaliana
AT3G09200 10.0kb upstream 10.0kb upstream 12025 true Chr3: 2823090-2835114 Arabidopsis thaliana
AT3G09200 10.0kb upstream 10.0kb upstream 10000 false Chr3: 2825115-2835114 Arabidopsis thaliana
AT3G09200 10.0kb downstream 10.0kb downstream 12025 true Chr3: 2813090-2825114 Arabidopsis thaliana
AT3G09200 10.0kb downstream 10.0kb downstream 10000 false Chr3: 2813090-2823089 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378301 5261 Brassicaceae View MSA
123836746 5264 Brassicales-Malvales View MSA
124342925 5266 SBM View MSA
124243369 5268 Malvidae View MSA
124061567 5270 Rosid View MSA
123747108 5271 Pentapetalae View MSA
122786385 5272 Eudicot View MSA
122042027 5273 Angiosperm View MSA
121345246 5274 Embryophyte View MSA
123428323 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 130.703     High  
cufflinks 129.386     High  
cufflinks 126.666     High  
cufflinks 145.829     High  
cufflinks 103.32     High Low
cufflinks 181.414     High High

0 Strain