Gene : AT3G09085 A. thaliana TAIR10
Defline:  (1 of 3) PF06127 - Protein of unknown function (DUF962) (DUF962) Genomic Order:  862
Name:  ? AT3G09085 Secondary Identifier:  ? PAC:19662470
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G09085 0.5kb upstream 0.5kb upstream 1108 true Chr3: 2781633-2782740 Arabidopsis thaliana
AT3G09085 0.5kb upstream 0.5kb upstream 500 false Chr3: 2781633-2782132 Arabidopsis thaliana
AT3G09085 0.5kb downstream 0.5kb downstream 1108 true Chr3: 2782133-2783240 Arabidopsis thaliana
AT3G09085 0.5kb downstream 0.5kb downstream 500 false Chr3: 2782741-2783240 Arabidopsis thaliana
AT3G09085 1.0kb upstream 1.0kb upstream 1608 true Chr3: 2781133-2782740 Arabidopsis thaliana
AT3G09085 1.0kb upstream 1.0kb upstream 1000 false Chr3: 2781133-2782132 Arabidopsis thaliana
AT3G09085 1.0kb downstream 1.0kb downstream 1608 true Chr3: 2782133-2783740 Arabidopsis thaliana
AT3G09085 1.0kb downstream 1.0kb downstream 1000 false Chr3: 2782741-2783740 Arabidopsis thaliana
AT3G09085 2.0kb upstream 2.0kb upstream 2608 true Chr3: 2780133-2782740 Arabidopsis thaliana
AT3G09085 2.0kb upstream 2.0kb upstream 2000 false Chr3: 2780133-2782132 Arabidopsis thaliana
AT3G09085 2.0kb downstream 2.0kb downstream 2608 true Chr3: 2782133-2784740 Arabidopsis thaliana
AT3G09085 2.0kb downstream 2.0kb downstream 2000 false Chr3: 2782741-2784740 Arabidopsis thaliana
AT3G09085 5.0kb upstream 5.0kb upstream 5608 true Chr3: 2777133-2782740 Arabidopsis thaliana
AT3G09085 5.0kb upstream 5.0kb upstream 5000 false Chr3: 2777133-2782132 Arabidopsis thaliana
AT3G09085 5.0kb downstream 5.0kb downstream 5608 true Chr3: 2782133-2787740 Arabidopsis thaliana
AT3G09085 5.0kb downstream 5.0kb downstream 5000 false Chr3: 2782741-2787740 Arabidopsis thaliana
AT3G09085 10.0kb upstream 10.0kb upstream 10608 true Chr3: 2772133-2782740 Arabidopsis thaliana
AT3G09085 10.0kb upstream 10.0kb upstream 10000 false Chr3: 2772133-2782132 Arabidopsis thaliana
AT3G09085 10.0kb downstream 10.0kb downstream 10608 true Chr3: 2782133-2792740 Arabidopsis thaliana
AT3G09085 10.0kb downstream 10.0kb downstream 10000 false Chr3: 2782741-2792740 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366973 5261 Brassicaceae View MSA
123836133 5264 Brassicales-Malvales View MSA
124337113 5266 SBM View MSA
124247411 5268 Malvidae View MSA
124061549 5270 Rosid View MSA
123745593 5271 Pentapetalae View MSA
122787415 5272 Eudicot View MSA
122044041 5273 Angiosperm View MSA
121350292 5274 Embryophyte View MSA
123424531 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.792        
cufflinks 5.381       Low
cufflinks 7.988        
cufflinks 6.679        
cufflinks 10.624       High
cufflinks 6.052        

0 Strain