Gene : AT3G03820 A. thaliana TAIR10
Defline:  (1 of 11) PTHR31929//PTHR31929:SF11 - FAMILY NOT NAMED // AUXIN-INDUCED PROTEIN-LIKE-RELATED Genomic Order:  320
Name:  ? AT3G03820 Secondary Identifier:  ? PAC:19664621
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G03820 0.5kb upstream 0.5kb upstream 791 true Chr3: 976933-977723 Arabidopsis thaliana
AT3G03820 0.5kb upstream 0.5kb upstream 500 false Chr3: 977224-977723 Arabidopsis thaliana
AT3G03820 0.5kb downstream 0.5kb downstream 791 true Chr3: 976433-977223 Arabidopsis thaliana
AT3G03820 0.5kb downstream 0.5kb downstream 500 false Chr3: 976433-976932 Arabidopsis thaliana
AT3G03820 1.0kb upstream 1.0kb upstream 1291 true Chr3: 976933-978223 Arabidopsis thaliana
AT3G03820 1.0kb upstream 1.0kb upstream 1000 false Chr3: 977224-978223 Arabidopsis thaliana
AT3G03820 1.0kb downstream 1.0kb downstream 1291 true Chr3: 975933-977223 Arabidopsis thaliana
AT3G03820 1.0kb downstream 1.0kb downstream 1000 false Chr3: 975933-976932 Arabidopsis thaliana
AT3G03820 2.0kb upstream 2.0kb upstream 2291 true Chr3: 976933-979223 Arabidopsis thaliana
AT3G03820 2.0kb upstream 2.0kb upstream 2000 false Chr3: 977224-979223 Arabidopsis thaliana
AT3G03820 2.0kb downstream 2.0kb downstream 2291 true Chr3: 974933-977223 Arabidopsis thaliana
AT3G03820 2.0kb downstream 2.0kb downstream 2000 false Chr3: 974933-976932 Arabidopsis thaliana
AT3G03820 5.0kb upstream 5.0kb upstream 5291 true Chr3: 976933-982223 Arabidopsis thaliana
AT3G03820 5.0kb upstream 5.0kb upstream 5000 false Chr3: 977224-982223 Arabidopsis thaliana
AT3G03820 5.0kb downstream 5.0kb downstream 5291 true Chr3: 971933-977223 Arabidopsis thaliana
AT3G03820 5.0kb downstream 5.0kb downstream 5000 false Chr3: 971933-976932 Arabidopsis thaliana
AT3G03820 10.0kb upstream 10.0kb upstream 10291 true Chr3: 976933-987223 Arabidopsis thaliana
AT3G03820 10.0kb upstream 10.0kb upstream 10000 false Chr3: 977224-987223 Arabidopsis thaliana
AT3G03820 10.0kb downstream 10.0kb downstream 10291 true Chr3: 966933-977223 Arabidopsis thaliana
AT3G03820 10.0kb downstream 10.0kb downstream 10000 false Chr3: 966933-976932 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381363 5261 Brassicaceae View MSA
123803203 5264 Brassicales-Malvales View MSA
124300329 5266 SBM View MSA
124151533 5268 Malvidae View MSA
123876945 5270 Rosid View MSA
123753786 5271 Pentapetalae View MSA
122797448 5272 Eudicot View MSA
122051602 5273 Angiosperm View MSA
121351344 5274 Embryophyte View MSA
123382129 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.992       High
cufflinks 0.158     Low  
cufflinks 5.48        
cufflinks 0.576        
cufflinks 3.836        
cufflinks 0.053     Low Low

0 Strain