Gene : CAT4 A. thaliana TAIR10
Primary Identifier:  ? AT3G03720 Defline:  (1 of 1) PTHR11785:SF379 - CATIONIC AMINO ACID TRANSPORTER 4, VACUOLAR
Genomic Order:  307 Name:  ? AT3G03720
Secondary Identifier:  ? PAC:19661328
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G03720 0.5kb upstream 0.5kb upstream 5863 true Chr3: 925612-931474 Arabidopsis thaliana
AT3G03720 0.5kb upstream 0.5kb upstream 500 false Chr3: 930975-931474 Arabidopsis thaliana
AT3G03720 0.5kb downstream 0.5kb downstream 5863 true Chr3: 925112-930974 Arabidopsis thaliana
AT3G03720 0.5kb downstream 0.5kb downstream 500 false Chr3: 925112-925611 Arabidopsis thaliana
AT3G03720 1.0kb upstream 1.0kb upstream 6363 true Chr3: 925612-931974 Arabidopsis thaliana
AT3G03720 1.0kb upstream 1.0kb upstream 1000 false Chr3: 930975-931974 Arabidopsis thaliana
AT3G03720 1.0kb downstream 1.0kb downstream 6363 true Chr3: 924612-930974 Arabidopsis thaliana
AT3G03720 1.0kb downstream 1.0kb downstream 1000 false Chr3: 924612-925611 Arabidopsis thaliana
AT3G03720 2.0kb upstream 2.0kb upstream 7363 true Chr3: 925612-932974 Arabidopsis thaliana
AT3G03720 2.0kb upstream 2.0kb upstream 2000 false Chr3: 930975-932974 Arabidopsis thaliana
AT3G03720 2.0kb downstream 2.0kb downstream 7363 true Chr3: 923612-930974 Arabidopsis thaliana
AT3G03720 2.0kb downstream 2.0kb downstream 2000 false Chr3: 923612-925611 Arabidopsis thaliana
AT3G03720 5.0kb upstream 5.0kb upstream 10363 true Chr3: 925612-935974 Arabidopsis thaliana
AT3G03720 5.0kb upstream 5.0kb upstream 5000 false Chr3: 930975-935974 Arabidopsis thaliana
AT3G03720 5.0kb downstream 5.0kb downstream 10363 true Chr3: 920612-930974 Arabidopsis thaliana
AT3G03720 5.0kb downstream 5.0kb downstream 5000 false Chr3: 920612-925611 Arabidopsis thaliana
AT3G03720 10.0kb upstream 10.0kb upstream 15363 true Chr3: 925612-940974 Arabidopsis thaliana
AT3G03720 10.0kb upstream 10.0kb upstream 10000 false Chr3: 930975-940974 Arabidopsis thaliana
AT3G03720 10.0kb downstream 10.0kb downstream 15363 true Chr3: 915612-930974 Arabidopsis thaliana
AT3G03720 10.0kb downstream 10.0kb downstream 10000 false Chr3: 915612-925611 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122329956 5261 Brassicaceae Singleton cluster - no MSA
123837686 5264 Brassicales-Malvales View MSA
124349711 5266 SBM View MSA
124249276 5268 Malvidae View MSA
124069554 5270 Rosid View MSA
123740707 5271 Pentapetalae View MSA
122796807 5272 Eudicot View MSA
122048985 5273 Angiosperm View MSA
121349992 5274 Embryophyte View MSA
123428616 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.518        
cufflinks 2.425       Low
cufflinks 4.403        
cufflinks 3.189        
cufflinks 5.573       High
cufflinks 2.215       Low

0 Strain