Gene : NPC4 A. thaliana TAIR10
Primary Identifier:  ? AT3G03530 Defline:  (1 of 3) 3.1.4.3 - Phospholipase C / Lipophosphodiesterase I
Genomic Order:  287 Name:  ? AT3G03530
Secondary Identifier:  ? PAC:19661272
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana LIPASYN-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G03530 0.5kb upstream 0.5kb upstream 3045 true Chr3: 842499-845543 Arabidopsis thaliana
AT3G03530 0.5kb upstream 0.5kb upstream 500 false Chr3: 845044-845543 Arabidopsis thaliana
AT3G03530 0.5kb downstream 0.5kb downstream 3045 true Chr3: 841999-845043 Arabidopsis thaliana
AT3G03530 0.5kb downstream 0.5kb downstream 500 false Chr3: 841999-842498 Arabidopsis thaliana
AT3G03530 1.0kb upstream 1.0kb upstream 3545 true Chr3: 842499-846043 Arabidopsis thaliana
AT3G03530 1.0kb upstream 1.0kb upstream 1000 false Chr3: 845044-846043 Arabidopsis thaliana
AT3G03530 1.0kb downstream 1.0kb downstream 3545 true Chr3: 841499-845043 Arabidopsis thaliana
AT3G03530 1.0kb downstream 1.0kb downstream 1000 false Chr3: 841499-842498 Arabidopsis thaliana
AT3G03530 2.0kb upstream 2.0kb upstream 4545 true Chr3: 842499-847043 Arabidopsis thaliana
AT3G03530 2.0kb upstream 2.0kb upstream 2000 false Chr3: 845044-847043 Arabidopsis thaliana
AT3G03530 2.0kb downstream 2.0kb downstream 4545 true Chr3: 840499-845043 Arabidopsis thaliana
AT3G03530 2.0kb downstream 2.0kb downstream 2000 false Chr3: 840499-842498 Arabidopsis thaliana
AT3G03530 5.0kb upstream 5.0kb upstream 7545 true Chr3: 842499-850043 Arabidopsis thaliana
AT3G03530 5.0kb upstream 5.0kb upstream 5000 false Chr3: 845044-850043 Arabidopsis thaliana
AT3G03530 5.0kb downstream 5.0kb downstream 7545 true Chr3: 837499-845043 Arabidopsis thaliana
AT3G03530 5.0kb downstream 5.0kb downstream 5000 false Chr3: 837499-842498 Arabidopsis thaliana
AT3G03530 10.0kb upstream 10.0kb upstream 12545 true Chr3: 842499-855043 Arabidopsis thaliana
AT3G03530 10.0kb upstream 10.0kb upstream 10000 false Chr3: 845044-855043 Arabidopsis thaliana
AT3G03530 10.0kb downstream 10.0kb downstream 12545 true Chr3: 832499-845043 Arabidopsis thaliana
AT3G03530 10.0kb downstream 10.0kb downstream 10000 false Chr3: 832499-842498 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365377 5261 Brassicaceae View MSA
123831528 5264 Brassicales-Malvales View MSA
124345260 5266 SBM View MSA
124244843 5268 Malvidae View MSA
124067828 5270 Rosid View MSA
123747461 5271 Pentapetalae View MSA
122786129 5272 Eudicot View MSA
122043766 5273 Angiosperm View MSA
121350885 5274 Embryophyte View MSA
123381922 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.309        
cufflinks 5.523        
cufflinks 0.123     Low Low
cufflinks 7.808        
cufflinks 0.332        
cufflinks 10.088       High

0 Strain