Gene : AT3G03160 A. thaliana TAIR10
Defline:  (1 of 2) PTHR12701:SF12 - GB Genomic Order:  246
Name:  ? AT3G03160 Secondary Identifier:  ? PAC:19659941
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G03160 0.5kb upstream 0.5kb upstream 1200 true Chr3: 729268-730467 Arabidopsis thaliana
AT3G03160 0.5kb upstream 0.5kb upstream 500 false Chr3: 729268-729767 Arabidopsis thaliana
AT3G03160 0.5kb downstream 0.5kb downstream 1200 true Chr3: 729768-730967 Arabidopsis thaliana
AT3G03160 0.5kb downstream 0.5kb downstream 500 false Chr3: 730468-730967 Arabidopsis thaliana
AT3G03160 1.0kb upstream 1.0kb upstream 1700 true Chr3: 728768-730467 Arabidopsis thaliana
AT3G03160 1.0kb upstream 1.0kb upstream 1000 false Chr3: 728768-729767 Arabidopsis thaliana
AT3G03160 1.0kb downstream 1.0kb downstream 1700 true Chr3: 729768-731467 Arabidopsis thaliana
AT3G03160 1.0kb downstream 1.0kb downstream 1000 false Chr3: 730468-731467 Arabidopsis thaliana
AT3G03160 2.0kb upstream 2.0kb upstream 2700 true Chr3: 727768-730467 Arabidopsis thaliana
AT3G03160 2.0kb upstream 2.0kb upstream 2000 false Chr3: 727768-729767 Arabidopsis thaliana
AT3G03160 2.0kb downstream 2.0kb downstream 2700 true Chr3: 729768-732467 Arabidopsis thaliana
AT3G03160 2.0kb downstream 2.0kb downstream 2000 false Chr3: 730468-732467 Arabidopsis thaliana
AT3G03160 5.0kb upstream 5.0kb upstream 5700 true Chr3: 724768-730467 Arabidopsis thaliana
AT3G03160 5.0kb upstream 5.0kb upstream 5000 false Chr3: 724768-729767 Arabidopsis thaliana
AT3G03160 5.0kb downstream 5.0kb downstream 5700 true Chr3: 729768-735467 Arabidopsis thaliana
AT3G03160 5.0kb downstream 5.0kb downstream 5000 false Chr3: 730468-735467 Arabidopsis thaliana
AT3G03160 10.0kb upstream 10.0kb upstream 10700 true Chr3: 719768-730467 Arabidopsis thaliana
AT3G03160 10.0kb upstream 10.0kb upstream 10000 false Chr3: 719768-729767 Arabidopsis thaliana
AT3G03160 10.0kb downstream 10.0kb downstream 10700 true Chr3: 729768-740467 Arabidopsis thaliana
AT3G03160 10.0kb downstream 10.0kb downstream 10000 false Chr3: 730468-740467 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041316 5273 Angiosperm View MSA
122370337 5261 Brassicaceae View MSA
123835766 5264 Brassicales-Malvales View MSA
124337017 5266 SBM View MSA
124239124 5268 Malvidae View MSA
124062686 5270 Rosid View MSA
123746776 5271 Pentapetalae View MSA
122788736 5272 Eudicot View MSA
121348812 5274 Embryophyte View MSA
123381026 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.418     High  
cufflinks 58.62     High  
cufflinks 22.972       Low
cufflinks 60.758     High  
cufflinks 27.783     High  
cufflinks 67.122     High High

0 Strain