Gene : AT3G03270 A. thaliana TAIR10
Defline:  (1 of 41) PF00582 - Universal stress protein family (Usp) Genomic Order:  257
Name:  ? AT3G03270 Secondary Identifier:  ? PAC:19665139
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G03270 0.5kb upstream 0.5kb upstream 2306 true Chr3: 761310-763615 Arabidopsis thaliana
AT3G03270 0.5kb upstream 0.5kb upstream 500 false Chr3: 763116-763615 Arabidopsis thaliana
AT3G03270 0.5kb downstream 0.5kb downstream 2306 true Chr3: 760810-763115 Arabidopsis thaliana
AT3G03270 0.5kb downstream 0.5kb downstream 500 false Chr3: 760810-761309 Arabidopsis thaliana
AT3G03270 1.0kb upstream 1.0kb upstream 2806 true Chr3: 761310-764115 Arabidopsis thaliana
AT3G03270 1.0kb upstream 1.0kb upstream 1000 false Chr3: 763116-764115 Arabidopsis thaliana
AT3G03270 1.0kb downstream 1.0kb downstream 2806 true Chr3: 760310-763115 Arabidopsis thaliana
AT3G03270 1.0kb downstream 1.0kb downstream 1000 false Chr3: 760310-761309 Arabidopsis thaliana
AT3G03270 2.0kb upstream 2.0kb upstream 3806 true Chr3: 761310-765115 Arabidopsis thaliana
AT3G03270 2.0kb upstream 2.0kb upstream 2000 false Chr3: 763116-765115 Arabidopsis thaliana
AT3G03270 2.0kb downstream 2.0kb downstream 3806 true Chr3: 759310-763115 Arabidopsis thaliana
AT3G03270 2.0kb downstream 2.0kb downstream 2000 false Chr3: 759310-761309 Arabidopsis thaliana
AT3G03270 5.0kb upstream 5.0kb upstream 6806 true Chr3: 761310-768115 Arabidopsis thaliana
AT3G03270 5.0kb upstream 5.0kb upstream 5000 false Chr3: 763116-768115 Arabidopsis thaliana
AT3G03270 5.0kb downstream 5.0kb downstream 6806 true Chr3: 756310-763115 Arabidopsis thaliana
AT3G03270 5.0kb downstream 5.0kb downstream 5000 false Chr3: 756310-761309 Arabidopsis thaliana
AT3G03270 10.0kb upstream 10.0kb upstream 11806 true Chr3: 761310-773115 Arabidopsis thaliana
AT3G03270 10.0kb upstream 10.0kb upstream 10000 false Chr3: 763116-773115 Arabidopsis thaliana
AT3G03270 10.0kb downstream 10.0kb downstream 11806 true Chr3: 751310-763115 Arabidopsis thaliana
AT3G03270 10.0kb downstream 10.0kb downstream 10000 false Chr3: 751310-761309 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122330333 5261 Brassicaceae Singleton cluster - no MSA
123771588 5264 Brassicales-Malvales Singleton cluster - no MSA
124270116 5266 SBM Singleton cluster - no MSA
124248014 5268 Malvidae View MSA
124066369 5270 Rosid View MSA
123742988 5271 Pentapetalae View MSA
122795683 5272 Eudicot View MSA
122048128 5273 Angiosperm View MSA
121348607 5274 Embryophyte View MSA
123427901 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.01       Low
cufflinks 40.112     High  
cufflinks 6.442        
cufflinks 35.299     High  
cufflinks 6.124        
cufflinks 38.237     High  

0 Strain