Gene : AT3G02650 A. thaliana TAIR10
Defline:  (1 of 185) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  193
Name:  ? AT3G02650 Secondary Identifier:  ? PAC:19663616
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G02650 0.5kb upstream 0.5kb upstream 2557 true Chr3: 567547-570103 Arabidopsis thaliana
AT3G02650 0.5kb upstream 0.5kb upstream 500 false Chr3: 567547-568046 Arabidopsis thaliana
AT3G02650 0.5kb downstream 0.5kb downstream 2557 true Chr3: 568047-570603 Arabidopsis thaliana
AT3G02650 0.5kb downstream 0.5kb downstream 500 false Chr3: 570104-570603 Arabidopsis thaliana
AT3G02650 1.0kb upstream 1.0kb upstream 3057 true Chr3: 567047-570103 Arabidopsis thaliana
AT3G02650 1.0kb upstream 1.0kb upstream 1000 false Chr3: 567047-568046 Arabidopsis thaliana
AT3G02650 1.0kb downstream 1.0kb downstream 3057 true Chr3: 568047-571103 Arabidopsis thaliana
AT3G02650 1.0kb downstream 1.0kb downstream 1000 false Chr3: 570104-571103 Arabidopsis thaliana
AT3G02650 2.0kb upstream 2.0kb upstream 4057 true Chr3: 566047-570103 Arabidopsis thaliana
AT3G02650 2.0kb upstream 2.0kb upstream 2000 false Chr3: 566047-568046 Arabidopsis thaliana
AT3G02650 2.0kb downstream 2.0kb downstream 4057 true Chr3: 568047-572103 Arabidopsis thaliana
AT3G02650 2.0kb downstream 2.0kb downstream 2000 false Chr3: 570104-572103 Arabidopsis thaliana
AT3G02650 5.0kb upstream 5.0kb upstream 7057 true Chr3: 563047-570103 Arabidopsis thaliana
AT3G02650 5.0kb upstream 5.0kb upstream 5000 false Chr3: 563047-568046 Arabidopsis thaliana
AT3G02650 5.0kb downstream 5.0kb downstream 7057 true Chr3: 568047-575103 Arabidopsis thaliana
AT3G02650 5.0kb downstream 5.0kb downstream 5000 false Chr3: 570104-575103 Arabidopsis thaliana
AT3G02650 10.0kb upstream 10.0kb upstream 12057 true Chr3: 558047-570103 Arabidopsis thaliana
AT3G02650 10.0kb upstream 10.0kb upstream 10000 false Chr3: 558047-568046 Arabidopsis thaliana
AT3G02650 10.0kb downstream 10.0kb downstream 12057 true Chr3: 568047-580103 Arabidopsis thaliana
AT3G02650 10.0kb downstream 10.0kb downstream 10000 false Chr3: 570104-580103 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368808 5261 Brassicaceae View MSA
123840230 5264 Brassicales-Malvales View MSA
124343591 5266 SBM View MSA
124242497 5268 Malvidae View MSA
124067728 5270 Rosid View MSA
123742188 5271 Pentapetalae View MSA
122792936 5272 Eudicot View MSA
122045505 5273 Angiosperm View MSA
121310455 5274 Embryophyte View MSA
123347933 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.874        
cufflinks 10.152        
cufflinks 8.245        
cufflinks 12.224        
cufflinks 6.697       Low
cufflinks 14.02       High

0 Strain