Gene : AT3G10550 A. thaliana TAIR10
Defline:  (1 of 2) 3.1.3.64//3.1.3.95 - Phosphatidylinositol-3-phosphatase / Phosphatidyl-3-phosphate 3-phosphohydrolase // Phosphatidylinositol-3,5-bisphosphate 3-phosphatase / PtdIns-3,5-P(2) 3-Ptase Genomic Order:  1018
Name:  ? AT3G10550 Secondary Identifier:  ? PAC:19663685
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6367 Arabidopsis thaliana pathologic  
Athaliana PWY-6368 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G10550 0.5kb upstream 0.5kb upstream 6124 true Chr3: 3292899-3299022 Arabidopsis thaliana
AT3G10550 0.5kb upstream 0.5kb upstream 500 false Chr3: 3298523-3299022 Arabidopsis thaliana
AT3G10550 0.5kb downstream 0.5kb downstream 6124 true Chr3: 3292399-3298522 Arabidopsis thaliana
AT3G10550 0.5kb downstream 0.5kb downstream 500 false Chr3: 3292399-3292898 Arabidopsis thaliana
AT3G10550 1.0kb upstream 1.0kb upstream 6624 true Chr3: 3292899-3299522 Arabidopsis thaliana
AT3G10550 1.0kb upstream 1.0kb upstream 1000 false Chr3: 3298523-3299522 Arabidopsis thaliana
AT3G10550 1.0kb downstream 1.0kb downstream 6624 true Chr3: 3291899-3298522 Arabidopsis thaliana
AT3G10550 1.0kb downstream 1.0kb downstream 1000 false Chr3: 3291899-3292898 Arabidopsis thaliana
AT3G10550 2.0kb upstream 2.0kb upstream 7624 true Chr3: 3292899-3300522 Arabidopsis thaliana
AT3G10550 2.0kb upstream 2.0kb upstream 2000 false Chr3: 3298523-3300522 Arabidopsis thaliana
AT3G10550 2.0kb downstream 2.0kb downstream 7624 true Chr3: 3290899-3298522 Arabidopsis thaliana
AT3G10550 2.0kb downstream 2.0kb downstream 2000 false Chr3: 3290899-3292898 Arabidopsis thaliana
AT3G10550 5.0kb upstream 5.0kb upstream 10624 true Chr3: 3292899-3303522 Arabidopsis thaliana
AT3G10550 5.0kb upstream 5.0kb upstream 5000 false Chr3: 3298523-3303522 Arabidopsis thaliana
AT3G10550 5.0kb downstream 5.0kb downstream 10624 true Chr3: 3287899-3298522 Arabidopsis thaliana
AT3G10550 5.0kb downstream 5.0kb downstream 5000 false Chr3: 3287899-3292898 Arabidopsis thaliana
AT3G10550 10.0kb upstream 10.0kb upstream 15624 true Chr3: 3292899-3308522 Arabidopsis thaliana
AT3G10550 10.0kb upstream 10.0kb upstream 10000 false Chr3: 3298523-3308522 Arabidopsis thaliana
AT3G10550 10.0kb downstream 10.0kb downstream 15624 true Chr3: 3282899-3298522 Arabidopsis thaliana
AT3G10550 10.0kb downstream 10.0kb downstream 10000 false Chr3: 3282899-3292898 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373913 5261 Brassicaceae View MSA
123833188 5264 Brassicales-Malvales View MSA
124321853 5266 SBM View MSA
124240271 5268 Malvidae View MSA
124069082 5270 Rosid View MSA
123744322 5271 Pentapetalae View MSA
122796754 5272 Eudicot View MSA
122047455 5273 Angiosperm View MSA
121350859 5274 Embryophyte View MSA
123381910 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.254        
cufflinks 5.111        
cufflinks 3.379        
cufflinks 5.739       High
cufflinks 3.325        
cufflinks 4.618        

0 Strain