Gene : AT3G02400 A. thaliana TAIR10
Defline:  (1 of 1) PTHR23308//PTHR23308:SF34 - NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1 // F16B3.3 PROTEIN Genomic Order:  164
Name:  ? AT3G02400 Secondary Identifier:  ? PAC:19660792
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G02400 0.5kb upstream 0.5kb upstream 2258 true Chr3: 489330-491587 Arabidopsis thaliana
AT3G02400 0.5kb upstream 0.5kb upstream 500 false Chr3: 489330-489829 Arabidopsis thaliana
AT3G02400 0.5kb downstream 0.5kb downstream 2258 true Chr3: 489830-492087 Arabidopsis thaliana
AT3G02400 0.5kb downstream 0.5kb downstream 500 false Chr3: 491588-492087 Arabidopsis thaliana
AT3G02400 1.0kb upstream 1.0kb upstream 2758 true Chr3: 488830-491587 Arabidopsis thaliana
AT3G02400 1.0kb upstream 1.0kb upstream 1000 false Chr3: 488830-489829 Arabidopsis thaliana
AT3G02400 1.0kb downstream 1.0kb downstream 2758 true Chr3: 489830-492587 Arabidopsis thaliana
AT3G02400 1.0kb downstream 1.0kb downstream 1000 false Chr3: 491588-492587 Arabidopsis thaliana
AT3G02400 2.0kb upstream 2.0kb upstream 3758 true Chr3: 487830-491587 Arabidopsis thaliana
AT3G02400 2.0kb upstream 2.0kb upstream 2000 false Chr3: 487830-489829 Arabidopsis thaliana
AT3G02400 2.0kb downstream 2.0kb downstream 3758 true Chr3: 489830-493587 Arabidopsis thaliana
AT3G02400 2.0kb downstream 2.0kb downstream 2000 false Chr3: 491588-493587 Arabidopsis thaliana
AT3G02400 5.0kb upstream 5.0kb upstream 6758 true Chr3: 484830-491587 Arabidopsis thaliana
AT3G02400 5.0kb upstream 5.0kb upstream 5000 false Chr3: 484830-489829 Arabidopsis thaliana
AT3G02400 5.0kb downstream 5.0kb downstream 6758 true Chr3: 489830-496587 Arabidopsis thaliana
AT3G02400 5.0kb downstream 5.0kb downstream 5000 false Chr3: 491588-496587 Arabidopsis thaliana
AT3G02400 10.0kb upstream 10.0kb upstream 11758 true Chr3: 479830-491587 Arabidopsis thaliana
AT3G02400 10.0kb upstream 10.0kb upstream 10000 false Chr3: 479830-489829 Arabidopsis thaliana
AT3G02400 10.0kb downstream 10.0kb downstream 11758 true Chr3: 489830-501587 Arabidopsis thaliana
AT3G02400 10.0kb downstream 10.0kb downstream 10000 false Chr3: 491588-501587 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381085 5261 Brassicaceae View MSA
123835413 5264 Brassicales-Malvales View MSA
124346973 5266 SBM View MSA
124243983 5268 Malvidae View MSA
124050335 5270 Rosid View MSA
123743781 5271 Pentapetalae View MSA
122792695 5272 Eudicot View MSA
122045754 5273 Angiosperm View MSA
121310497 5274 Embryophyte View MSA
123427201 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.416        
cufflinks 5.627        
cufflinks 3.48       Low
cufflinks 7.297       High
cufflinks 4.258        
cufflinks 6.538        

0 Strain