Gene : AT3G02250 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31741:SF17 - O-FUCOSYLTRANSFERASE-LIKE PROTEIN Genomic Order:  149
Name:  ? AT3G02250 Secondary Identifier:  ? PAC:19663892
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G02250 0.5kb upstream 0.5kb upstream 3761 true Chr3: 423801-427561 Arabidopsis thaliana
AT3G02250 0.5kb upstream 0.5kb upstream 500 false Chr3: 427062-427561 Arabidopsis thaliana
AT3G02250 0.5kb downstream 0.5kb downstream 3761 true Chr3: 423301-427061 Arabidopsis thaliana
AT3G02250 0.5kb downstream 0.5kb downstream 500 false Chr3: 423301-423800 Arabidopsis thaliana
AT3G02250 1.0kb upstream 1.0kb upstream 4261 true Chr3: 423801-428061 Arabidopsis thaliana
AT3G02250 1.0kb upstream 1.0kb upstream 1000 false Chr3: 427062-428061 Arabidopsis thaliana
AT3G02250 1.0kb downstream 1.0kb downstream 4261 true Chr3: 422801-427061 Arabidopsis thaliana
AT3G02250 1.0kb downstream 1.0kb downstream 1000 false Chr3: 422801-423800 Arabidopsis thaliana
AT3G02250 2.0kb upstream 2.0kb upstream 5261 true Chr3: 423801-429061 Arabidopsis thaliana
AT3G02250 2.0kb upstream 2.0kb upstream 2000 false Chr3: 427062-429061 Arabidopsis thaliana
AT3G02250 2.0kb downstream 2.0kb downstream 5261 true Chr3: 421801-427061 Arabidopsis thaliana
AT3G02250 2.0kb downstream 2.0kb downstream 2000 false Chr3: 421801-423800 Arabidopsis thaliana
AT3G02250 5.0kb upstream 5.0kb upstream 8261 true Chr3: 423801-432061 Arabidopsis thaliana
AT3G02250 5.0kb upstream 5.0kb upstream 5000 false Chr3: 427062-432061 Arabidopsis thaliana
AT3G02250 5.0kb downstream 5.0kb downstream 8261 true Chr3: 418801-427061 Arabidopsis thaliana
AT3G02250 5.0kb downstream 5.0kb downstream 5000 false Chr3: 418801-423800 Arabidopsis thaliana
AT3G02250 10.0kb upstream 10.0kb upstream 13261 true Chr3: 423801-437061 Arabidopsis thaliana
AT3G02250 10.0kb upstream 10.0kb upstream 10000 false Chr3: 427062-437061 Arabidopsis thaliana
AT3G02250 10.0kb downstream 10.0kb downstream 13261 true Chr3: 413801-427061 Arabidopsis thaliana
AT3G02250 10.0kb downstream 10.0kb downstream 10000 false Chr3: 413801-423800 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361010 5261 Brassicaceae View MSA
123798083 5264 Brassicales-Malvales View MSA
124295761 5266 SBM View MSA
124148110 5268 Malvidae View MSA
124069771 5270 Rosid View MSA
123749174 5271 Pentapetalae View MSA
122786787 5272 Eudicot View MSA
122050382 5273 Angiosperm View MSA
121348832 5274 Embryophyte View MSA
123381034 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.98        
cufflinks 33.208     High High
cufflinks 19.345       Low
cufflinks 24.271        
cufflinks 20.491        
cufflinks 31.019     High High

0 Strain