Gene : RGP1 A. thaliana TAIR10
Primary Identifier:  ? AT3G02230 Defline:  (1 of 2) PTHR31682//PTHR31682:SF3 - FAMILY NOT NAMED // UDP-ARABINOPYRANOSE MUTASE 1-RELATED
Genomic Order:  146 Name:  ? AT3G02230
Secondary Identifier:  ? PAC:19658520
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G02230 0.5kb upstream 0.5kb upstream 2655 true Chr3: 414893-417547 Arabidopsis thaliana
AT3G02230 0.5kb upstream 0.5kb upstream 500 false Chr3: 414893-415392 Arabidopsis thaliana
AT3G02230 0.5kb downstream 0.5kb downstream 2655 true Chr3: 415393-418047 Arabidopsis thaliana
AT3G02230 0.5kb downstream 0.5kb downstream 500 false Chr3: 417548-418047 Arabidopsis thaliana
AT3G02230 1.0kb upstream 1.0kb upstream 3155 true Chr3: 414393-417547 Arabidopsis thaliana
AT3G02230 1.0kb upstream 1.0kb upstream 1000 false Chr3: 414393-415392 Arabidopsis thaliana
AT3G02230 1.0kb downstream 1.0kb downstream 3155 true Chr3: 415393-418547 Arabidopsis thaliana
AT3G02230 1.0kb downstream 1.0kb downstream 1000 false Chr3: 417548-418547 Arabidopsis thaliana
AT3G02230 2.0kb upstream 2.0kb upstream 4155 true Chr3: 413393-417547 Arabidopsis thaliana
AT3G02230 2.0kb upstream 2.0kb upstream 2000 false Chr3: 413393-415392 Arabidopsis thaliana
AT3G02230 2.0kb downstream 2.0kb downstream 4155 true Chr3: 415393-419547 Arabidopsis thaliana
AT3G02230 2.0kb downstream 2.0kb downstream 2000 false Chr3: 417548-419547 Arabidopsis thaliana
AT3G02230 5.0kb upstream 5.0kb upstream 7155 true Chr3: 410393-417547 Arabidopsis thaliana
AT3G02230 5.0kb upstream 5.0kb upstream 5000 false Chr3: 410393-415392 Arabidopsis thaliana
AT3G02230 5.0kb downstream 5.0kb downstream 7155 true Chr3: 415393-422547 Arabidopsis thaliana
AT3G02230 5.0kb downstream 5.0kb downstream 5000 false Chr3: 417548-422547 Arabidopsis thaliana
AT3G02230 10.0kb upstream 10.0kb upstream 12155 true Chr3: 405393-417547 Arabidopsis thaliana
AT3G02230 10.0kb upstream 10.0kb upstream 10000 false Chr3: 405393-415392 Arabidopsis thaliana
AT3G02230 10.0kb downstream 10.0kb downstream 12155 true Chr3: 415393-427547 Arabidopsis thaliana
AT3G02230 10.0kb downstream 10.0kb downstream 10000 false Chr3: 417548-427547 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376811 5261 Brassicaceae View MSA
123837947 5264 Brassicales-Malvales View MSA
124344090 5266 SBM View MSA
124253842 5268 Malvidae View MSA
124072741 5270 Rosid View MSA
123747058 5271 Pentapetalae View MSA
122796837 5272 Eudicot View MSA
122049597 5273 Angiosperm View MSA
121348829 5274 Embryophyte View MSA
123424490 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.486     High  
cufflinks 140.284     High  
cufflinks 24.243        
cufflinks 148.931     High  
cufflinks 23.268       Low
cufflinks 201.011     High High

0 Strain