Gene : AT3G02060 A. thaliana TAIR10
Defline:  (1 of 2) PTHR14025//PTHR14025:SF21 - FAMILY NOT NAMED // DEAD/DEAH BOX HELICASE-RELATED Genomic Order:  127
Name:  ? AT3G02060 Secondary Identifier:  ? PAC:19661471
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G02060 0.5kb upstream 0.5kb upstream 4974 true Chr3: 353860-358833 Arabidopsis thaliana
AT3G02060 0.5kb upstream 0.5kb upstream 500 false Chr3: 353860-354359 Arabidopsis thaliana
AT3G02060 0.5kb downstream 0.5kb downstream 4974 true Chr3: 354360-359333 Arabidopsis thaliana
AT3G02060 0.5kb downstream 0.5kb downstream 500 false Chr3: 358834-359333 Arabidopsis thaliana
AT3G02060 1.0kb upstream 1.0kb upstream 5474 true Chr3: 353360-358833 Arabidopsis thaliana
AT3G02060 1.0kb upstream 1.0kb upstream 1000 false Chr3: 353360-354359 Arabidopsis thaliana
AT3G02060 1.0kb downstream 1.0kb downstream 5474 true Chr3: 354360-359833 Arabidopsis thaliana
AT3G02060 1.0kb downstream 1.0kb downstream 1000 false Chr3: 358834-359833 Arabidopsis thaliana
AT3G02060 2.0kb upstream 2.0kb upstream 6474 true Chr3: 352360-358833 Arabidopsis thaliana
AT3G02060 2.0kb upstream 2.0kb upstream 2000 false Chr3: 352360-354359 Arabidopsis thaliana
AT3G02060 2.0kb downstream 2.0kb downstream 6474 true Chr3: 354360-360833 Arabidopsis thaliana
AT3G02060 2.0kb downstream 2.0kb downstream 2000 false Chr3: 358834-360833 Arabidopsis thaliana
AT3G02060 5.0kb upstream 5.0kb upstream 9474 true Chr3: 349360-358833 Arabidopsis thaliana
AT3G02060 5.0kb upstream 5.0kb upstream 5000 false Chr3: 349360-354359 Arabidopsis thaliana
AT3G02060 5.0kb downstream 5.0kb downstream 9474 true Chr3: 354360-363833 Arabidopsis thaliana
AT3G02060 5.0kb downstream 5.0kb downstream 5000 false Chr3: 358834-363833 Arabidopsis thaliana
AT3G02060 10.0kb upstream 10.0kb upstream 14474 true Chr3: 344360-358833 Arabidopsis thaliana
AT3G02060 10.0kb upstream 10.0kb upstream 10000 false Chr3: 344360-354359 Arabidopsis thaliana
AT3G02060 10.0kb downstream 10.0kb downstream 14474 true Chr3: 354360-368833 Arabidopsis thaliana
AT3G02060 10.0kb downstream 10.0kb downstream 10000 false Chr3: 358834-368833 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365664 5261 Brassicaceae View MSA
123835619 5264 Brassicales-Malvales View MSA
124345493 5266 SBM View MSA
124240257 5268 Malvidae View MSA
124064201 5270 Rosid View MSA
123751738 5271 Pentapetalae View MSA
122788297 5272 Eudicot View MSA
122045154 5273 Angiosperm View MSA
121349019 5274 Embryophyte View MSA
123425837 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.079       High
cufflinks 3.021        
cufflinks 5.56       High
cufflinks 2.783        
cufflinks 3.954        
cufflinks 2.456       Low

0 Strain