Gene : AT3G01920 A. thaliana TAIR10
Defline:  (1 of 1) PTHR17490//PTHR17490:SF7 - SUA5 // SUBFAMILY NOT NAMED Genomic Order:  112
Name:  ? AT3G01920 Secondary Identifier:  ? PAC:19664683
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G01920 0.5kb upstream 0.5kb upstream 2190 true Chr3: 316932-319121 Arabidopsis thaliana
AT3G01920 0.5kb upstream 0.5kb upstream 500 false Chr3: 316932-317431 Arabidopsis thaliana
AT3G01920 0.5kb downstream 0.5kb downstream 2190 true Chr3: 317432-319621 Arabidopsis thaliana
AT3G01920 0.5kb downstream 0.5kb downstream 500 false Chr3: 319122-319621 Arabidopsis thaliana
AT3G01920 1.0kb upstream 1.0kb upstream 2690 true Chr3: 316432-319121 Arabidopsis thaliana
AT3G01920 1.0kb upstream 1.0kb upstream 1000 false Chr3: 316432-317431 Arabidopsis thaliana
AT3G01920 1.0kb downstream 1.0kb downstream 2690 true Chr3: 317432-320121 Arabidopsis thaliana
AT3G01920 1.0kb downstream 1.0kb downstream 1000 false Chr3: 319122-320121 Arabidopsis thaliana
AT3G01920 2.0kb upstream 2.0kb upstream 3690 true Chr3: 315432-319121 Arabidopsis thaliana
AT3G01920 2.0kb upstream 2.0kb upstream 2000 false Chr3: 315432-317431 Arabidopsis thaliana
AT3G01920 2.0kb downstream 2.0kb downstream 3690 true Chr3: 317432-321121 Arabidopsis thaliana
AT3G01920 2.0kb downstream 2.0kb downstream 2000 false Chr3: 319122-321121 Arabidopsis thaliana
AT3G01920 5.0kb upstream 5.0kb upstream 6690 true Chr3: 312432-319121 Arabidopsis thaliana
AT3G01920 5.0kb upstream 5.0kb upstream 5000 false Chr3: 312432-317431 Arabidopsis thaliana
AT3G01920 5.0kb downstream 5.0kb downstream 6690 true Chr3: 317432-324121 Arabidopsis thaliana
AT3G01920 5.0kb downstream 5.0kb downstream 5000 false Chr3: 319122-324121 Arabidopsis thaliana
AT3G01920 10.0kb upstream 10.0kb upstream 11690 true Chr3: 307432-319121 Arabidopsis thaliana
AT3G01920 10.0kb upstream 10.0kb upstream 10000 false Chr3: 307432-317431 Arabidopsis thaliana
AT3G01920 10.0kb downstream 10.0kb downstream 11690 true Chr3: 317432-329121 Arabidopsis thaliana
AT3G01920 10.0kb downstream 10.0kb downstream 10000 false Chr3: 319122-329121 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362930 5261 Brassicaceae View MSA
123831571 5264 Brassicales-Malvales View MSA
124338340 5266 SBM View MSA
124236875 5268 Malvidae View MSA
124060641 5270 Rosid View MSA
123737324 5271 Pentapetalae View MSA
122790315 5272 Eudicot View MSA
122043463 5273 Angiosperm View MSA
121345910 5274 Embryophyte View MSA
123425116 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.111        
cufflinks 3.93        
cufflinks 19.231        
cufflinks 3.574        
cufflinks 21.183       High
cufflinks 2.87       Low

0 Strain