Gene : AT3G01850 A. thaliana TAIR10
Defline:  (1 of 3) 5.1.3.1 - Ribulose-phosphate 3-epimerase / Xylulose phosphate 3-epimerase Genomic Order:  105
Name:  ? AT3G01850 Secondary Identifier:  ? PAC:19662360
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana CALVIN-PWY Arabidopsis thaliana pathologic  
Athaliana NONOXIPENT-PWY Arabidopsis thaliana pathologic  
Athaliana PENTOSE-P-PWY Arabidopsis thaliana pathologic  
Athaliana PHOTOALL-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-5723 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G01850 0.5kb upstream 0.5kb upstream 2552 true Chr3: 299987-302538 Arabidopsis thaliana
AT3G01850 0.5kb upstream 0.5kb upstream 500 false Chr3: 302039-302538 Arabidopsis thaliana
AT3G01850 0.5kb downstream 0.5kb downstream 2552 true Chr3: 299487-302038 Arabidopsis thaliana
AT3G01850 0.5kb downstream 0.5kb downstream 500 false Chr3: 299487-299986 Arabidopsis thaliana
AT3G01850 1.0kb upstream 1.0kb upstream 3052 true Chr3: 299987-303038 Arabidopsis thaliana
AT3G01850 1.0kb upstream 1.0kb upstream 1000 false Chr3: 302039-303038 Arabidopsis thaliana
AT3G01850 1.0kb downstream 1.0kb downstream 3052 true Chr3: 298987-302038 Arabidopsis thaliana
AT3G01850 1.0kb downstream 1.0kb downstream 1000 false Chr3: 298987-299986 Arabidopsis thaliana
AT3G01850 2.0kb upstream 2.0kb upstream 4052 true Chr3: 299987-304038 Arabidopsis thaliana
AT3G01850 2.0kb upstream 2.0kb upstream 2000 false Chr3: 302039-304038 Arabidopsis thaliana
AT3G01850 2.0kb downstream 2.0kb downstream 4052 true Chr3: 297987-302038 Arabidopsis thaliana
AT3G01850 2.0kb downstream 2.0kb downstream 2000 false Chr3: 297987-299986 Arabidopsis thaliana
AT3G01850 5.0kb upstream 5.0kb upstream 7052 true Chr3: 299987-307038 Arabidopsis thaliana
AT3G01850 5.0kb upstream 5.0kb upstream 5000 false Chr3: 302039-307038 Arabidopsis thaliana
AT3G01850 5.0kb downstream 5.0kb downstream 7052 true Chr3: 294987-302038 Arabidopsis thaliana
AT3G01850 5.0kb downstream 5.0kb downstream 5000 false Chr3: 294987-299986 Arabidopsis thaliana
AT3G01850 10.0kb upstream 10.0kb upstream 12052 true Chr3: 299987-312038 Arabidopsis thaliana
AT3G01850 10.0kb upstream 10.0kb upstream 10000 false Chr3: 302039-312038 Arabidopsis thaliana
AT3G01850 10.0kb downstream 10.0kb downstream 12052 true Chr3: 289987-302038 Arabidopsis thaliana
AT3G01850 10.0kb downstream 10.0kb downstream 10000 false Chr3: 289987-299986 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122330055 5261 Brassicaceae Singleton cluster - no MSA
123840154 5264 Brassicales-Malvales View MSA
124344961 5266 SBM View MSA
124252799 5268 Malvidae View MSA
124064705 5270 Rosid View MSA
123748809 5271 Pentapetalae View MSA
122786225 5272 Eudicot View MSA
122042554 5273 Angiosperm View MSA
121347255 5274 Embryophyte View MSA
123428302 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.328        
cufflinks 8.526        
cufflinks 8.183        
cufflinks 7.902        
cufflinks 8.348        
cufflinks 5.793       Low

0 Strain