Gene : AT3G06340 A. thaliana TAIR10
Defline:  (1 of 2) PTHR24078//PTHR24078:SF224 - DNAJ HOMOLOG SUBFAMILY C MEMBER // DNAJ DOMAIN-CONTAINING PROTEIN Genomic Order:  610
Name:  ? AT3G06340 Secondary Identifier:  ? PAC:19660796
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G06340 0.5kb upstream 0.5kb upstream 4032 true Chr3: 1920207-1924238 Arabidopsis thaliana
AT3G06340 0.5kb upstream 0.5kb upstream 500 false Chr3: 1923739-1924238 Arabidopsis thaliana
AT3G06340 0.5kb downstream 0.5kb downstream 4032 true Chr3: 1919707-1923738 Arabidopsis thaliana
AT3G06340 0.5kb downstream 0.5kb downstream 500 false Chr3: 1919707-1920206 Arabidopsis thaliana
AT3G06340 1.0kb upstream 1.0kb upstream 4532 true Chr3: 1920207-1924738 Arabidopsis thaliana
AT3G06340 1.0kb upstream 1.0kb upstream 1000 false Chr3: 1923739-1924738 Arabidopsis thaliana
AT3G06340 1.0kb downstream 1.0kb downstream 4532 true Chr3: 1919207-1923738 Arabidopsis thaliana
AT3G06340 1.0kb downstream 1.0kb downstream 1000 false Chr3: 1919207-1920206 Arabidopsis thaliana
AT3G06340 2.0kb upstream 2.0kb upstream 5532 true Chr3: 1920207-1925738 Arabidopsis thaliana
AT3G06340 2.0kb upstream 2.0kb upstream 2000 false Chr3: 1923739-1925738 Arabidopsis thaliana
AT3G06340 2.0kb downstream 2.0kb downstream 5532 true Chr3: 1918207-1923738 Arabidopsis thaliana
AT3G06340 2.0kb downstream 2.0kb downstream 2000 false Chr3: 1918207-1920206 Arabidopsis thaliana
AT3G06340 5.0kb upstream 5.0kb upstream 8532 true Chr3: 1920207-1928738 Arabidopsis thaliana
AT3G06340 5.0kb upstream 5.0kb upstream 5000 false Chr3: 1923739-1928738 Arabidopsis thaliana
AT3G06340 5.0kb downstream 5.0kb downstream 8532 true Chr3: 1915207-1923738 Arabidopsis thaliana
AT3G06340 5.0kb downstream 5.0kb downstream 5000 false Chr3: 1915207-1920206 Arabidopsis thaliana
AT3G06340 10.0kb upstream 10.0kb upstream 13532 true Chr3: 1920207-1933738 Arabidopsis thaliana
AT3G06340 10.0kb upstream 10.0kb upstream 10000 false Chr3: 1923739-1933738 Arabidopsis thaliana
AT3G06340 10.0kb downstream 10.0kb downstream 13532 true Chr3: 1910207-1923738 Arabidopsis thaliana
AT3G06340 10.0kb downstream 10.0kb downstream 10000 false Chr3: 1910207-1920206 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377132 5261 Brassicaceae View MSA
123801449 5264 Brassicales-Malvales View MSA
124298749 5266 SBM View MSA
124250890 5268 Malvidae View MSA
124073467 5270 Rosid View MSA
123743094 5271 Pentapetalae View MSA
122796940 5272 Eudicot View MSA
122050144 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121348216 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.358        
cufflinks 2.405        
cufflinks 1.817       Low
cufflinks 2.99       High
cufflinks 1.976        
cufflinks 2.453        

0 Strain