Gene : CA1 A. thaliana TAIR10
Primary Identifier:  ? AT3G01500 Defline:  (1 of 2) PTHR11002:SF7 - CARBONIC ANHYDRASE 2, CHLOROPLASTIC-RELATED
Genomic Order:  67 Name:  ? AT3G01500
Secondary Identifier:  ? PAC:19658953
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana CYANCAT-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-241 Arabidopsis thaliana pathologic  
Athaliana PWY-7115 Arabidopsis thaliana pathologic  
Athaliana PWY-7117 Arabidopsis thaliana pathologic  
Athaliana PWYQT-4429 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G01500 0.5kb upstream 0.5kb upstream 3796 true Chr3: 194724-198519 Arabidopsis thaliana
AT3G01500 0.5kb upstream 0.5kb upstream 500 false Chr3: 198020-198519 Arabidopsis thaliana
AT3G01500 0.5kb downstream 0.5kb downstream 3796 true Chr3: 194224-198019 Arabidopsis thaliana
AT3G01500 0.5kb downstream 0.5kb downstream 500 false Chr3: 194224-194723 Arabidopsis thaliana
AT3G01500 1.0kb upstream 1.0kb upstream 4296 true Chr3: 194724-199019 Arabidopsis thaliana
AT3G01500 1.0kb upstream 1.0kb upstream 1000 false Chr3: 198020-199019 Arabidopsis thaliana
AT3G01500 1.0kb downstream 1.0kb downstream 4296 true Chr3: 193724-198019 Arabidopsis thaliana
AT3G01500 1.0kb downstream 1.0kb downstream 1000 false Chr3: 193724-194723 Arabidopsis thaliana
AT3G01500 2.0kb upstream 2.0kb upstream 5296 true Chr3: 194724-200019 Arabidopsis thaliana
AT3G01500 2.0kb upstream 2.0kb upstream 2000 false Chr3: 198020-200019 Arabidopsis thaliana
AT3G01500 2.0kb downstream 2.0kb downstream 5296 true Chr3: 192724-198019 Arabidopsis thaliana
AT3G01500 2.0kb downstream 2.0kb downstream 2000 false Chr3: 192724-194723 Arabidopsis thaliana
AT3G01500 5.0kb upstream 5.0kb upstream 8296 true Chr3: 194724-203019 Arabidopsis thaliana
AT3G01500 5.0kb upstream 5.0kb upstream 5000 false Chr3: 198020-203019 Arabidopsis thaliana
AT3G01500 5.0kb downstream 5.0kb downstream 8296 true Chr3: 189724-198019 Arabidopsis thaliana
AT3G01500 5.0kb downstream 5.0kb downstream 5000 false Chr3: 189724-194723 Arabidopsis thaliana
AT3G01500 10.0kb upstream 10.0kb upstream 13296 true Chr3: 194724-208019 Arabidopsis thaliana
AT3G01500 10.0kb upstream 10.0kb upstream 10000 false Chr3: 198020-208019 Arabidopsis thaliana
AT3G01500 10.0kb downstream 10.0kb downstream 13296 true Chr3: 184724-198019 Arabidopsis thaliana
AT3G01500 10.0kb downstream 10.0kb downstream 10000 false Chr3: 184724-194723 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379353 5261 Brassicaceae View MSA
123830150 5264 Brassicales-Malvales View MSA
124338108 5266 SBM View MSA
124244194 5268 Malvidae View MSA
124067847 5270 Rosid View MSA
123748034 5271 Pentapetalae View MSA
122785685 5272 Eudicot View MSA
122044024 5273 Angiosperm View MSA
121348783 5274 Embryophyte View MSA
123427888 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 219.463     High  
cufflinks 0.034     Low Low
cufflinks 195.802     High  
cufflinks 0.055     Low  
cufflinks 137.799     High  
cufflinks 0.085     Low  

0 Strain