Gene : AT3G01160 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12202:SF0 - PROTEIN F58B3.4 Genomic Order:  17
Name:  ? AT3G01160 Secondary Identifier:  ? PAC:19662011
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G01160 0.5kb upstream 0.5kb upstream 3422 true Chr3: 54541-57962 Arabidopsis thaliana
AT3G01160 0.5kb upstream 0.5kb upstream 500 false Chr3: 57463-57962 Arabidopsis thaliana
AT3G01160 0.5kb downstream 0.5kb downstream 3422 true Chr3: 54041-57462 Arabidopsis thaliana
AT3G01160 0.5kb downstream 0.5kb downstream 500 false Chr3: 54041-54540 Arabidopsis thaliana
AT3G01160 1.0kb upstream 1.0kb upstream 3922 true Chr3: 54541-58462 Arabidopsis thaliana
AT3G01160 1.0kb upstream 1.0kb upstream 1000 false Chr3: 57463-58462 Arabidopsis thaliana
AT3G01160 1.0kb downstream 1.0kb downstream 3922 true Chr3: 53541-57462 Arabidopsis thaliana
AT3G01160 1.0kb downstream 1.0kb downstream 1000 false Chr3: 53541-54540 Arabidopsis thaliana
AT3G01160 2.0kb upstream 2.0kb upstream 4922 true Chr3: 54541-59462 Arabidopsis thaliana
AT3G01160 2.0kb upstream 2.0kb upstream 2000 false Chr3: 57463-59462 Arabidopsis thaliana
AT3G01160 2.0kb downstream 2.0kb downstream 4922 true Chr3: 52541-57462 Arabidopsis thaliana
AT3G01160 2.0kb downstream 2.0kb downstream 2000 false Chr3: 52541-54540 Arabidopsis thaliana
AT3G01160 5.0kb upstream 5.0kb upstream 7922 true Chr3: 54541-62462 Arabidopsis thaliana
AT3G01160 5.0kb upstream 5.0kb upstream 5000 false Chr3: 57463-62462 Arabidopsis thaliana
AT3G01160 5.0kb downstream 5.0kb downstream 7922 true Chr3: 49541-57462 Arabidopsis thaliana
AT3G01160 5.0kb downstream 5.0kb downstream 5000 false Chr3: 49541-54540 Arabidopsis thaliana
AT3G01160 10.0kb upstream 10.0kb upstream 12922 true Chr3: 54541-67462 Arabidopsis thaliana
AT3G01160 10.0kb upstream 10.0kb upstream 10000 false Chr3: 57463-67462 Arabidopsis thaliana
AT3G01160 10.0kb downstream 10.0kb downstream 12922 true Chr3: 44541-57462 Arabidopsis thaliana
AT3G01160 10.0kb downstream 10.0kb downstream 10000 false Chr3: 44541-54540 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361507 5261 Brassicaceae View MSA
123829175 5264 Brassicales-Malvales View MSA
124343179 5266 SBM View MSA
124240141 5268 Malvidae View MSA
124067821 5270 Rosid View MSA
123737392 5271 Pentapetalae View MSA
122788396 5272 Eudicot View MSA
122046385 5273 Angiosperm View MSA
121346233 5274 Embryophyte View MSA
123423804 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.57        
cufflinks 12.924        
cufflinks 8.755        
cufflinks 14.864        
cufflinks 7.504       Low
cufflinks 15.534       High

0 Strain