Gene : AT3G01175 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10759//PTHR10759:SF12 - 60S RIBOSOMAL PROTEIN L34 // SUBFAMILY NOT NAMED Genomic Order:  19
Name:  ? AT3G01175 Secondary Identifier:  ? PAC:19663943
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G01175 0.5kb upstream 0.5kb upstream 1875 true Chr3: 58971-60845 Arabidopsis thaliana
AT3G01175 0.5kb upstream 0.5kb upstream 500 false Chr3: 58971-59470 Arabidopsis thaliana
AT3G01175 0.5kb downstream 0.5kb downstream 1875 true Chr3: 59471-61345 Arabidopsis thaliana
AT3G01175 0.5kb downstream 0.5kb downstream 500 false Chr3: 60846-61345 Arabidopsis thaliana
AT3G01175 1.0kb upstream 1.0kb upstream 2375 true Chr3: 58471-60845 Arabidopsis thaliana
AT3G01175 1.0kb upstream 1.0kb upstream 1000 false Chr3: 58471-59470 Arabidopsis thaliana
AT3G01175 1.0kb downstream 1.0kb downstream 2375 true Chr3: 59471-61845 Arabidopsis thaliana
AT3G01175 1.0kb downstream 1.0kb downstream 1000 false Chr3: 60846-61845 Arabidopsis thaliana
AT3G01175 2.0kb upstream 2.0kb upstream 3375 true Chr3: 57471-60845 Arabidopsis thaliana
AT3G01175 2.0kb upstream 2.0kb upstream 2000 false Chr3: 57471-59470 Arabidopsis thaliana
AT3G01175 2.0kb downstream 2.0kb downstream 3375 true Chr3: 59471-62845 Arabidopsis thaliana
AT3G01175 2.0kb downstream 2.0kb downstream 2000 false Chr3: 60846-62845 Arabidopsis thaliana
AT3G01175 5.0kb upstream 5.0kb upstream 6375 true Chr3: 54471-60845 Arabidopsis thaliana
AT3G01175 5.0kb upstream 5.0kb upstream 5000 false Chr3: 54471-59470 Arabidopsis thaliana
AT3G01175 5.0kb downstream 5.0kb downstream 6375 true Chr3: 59471-65845 Arabidopsis thaliana
AT3G01175 5.0kb downstream 5.0kb downstream 5000 false Chr3: 60846-65845 Arabidopsis thaliana
AT3G01175 10.0kb upstream 10.0kb upstream 11375 true Chr3: 49471-60845 Arabidopsis thaliana
AT3G01175 10.0kb upstream 10.0kb upstream 10000 false Chr3: 49471-59470 Arabidopsis thaliana
AT3G01175 10.0kb downstream 10.0kb downstream 11375 true Chr3: 59471-70845 Arabidopsis thaliana
AT3G01175 10.0kb downstream 10.0kb downstream 10000 false Chr3: 60846-70845 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379510 5261 Brassicaceae View MSA
123802306 5264 Brassicales-Malvales View MSA
124299512 5266 SBM View MSA
124250472 5268 Malvidae View MSA
124063028 5270 Rosid View MSA
123747656 5271 Pentapetalae View MSA
122792050 5272 Eudicot View MSA
122050255 5273 Angiosperm View MSA
121311827 5274 Embryophyte View MSA
123349068 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.126        
cufflinks 0.878        
cufflinks 0.241     Low Low
cufflinks 2.726       High
cufflinks 0.408        
cufflinks 2.254        

0 Strain