Gene : VDAC1 A. thaliana TAIR10
Primary Identifier:  ? AT3G01280 Defline:  (1 of 2) PTHR11743//PTHR11743:SF31 - VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL // SUBFAMILY NOT NAMED
Genomic Order:  31 Name:  ? AT3G01280
Secondary Identifier:  ? PAC:19663390
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G01280 0.5kb upstream 0.5kb upstream 2758 true Chr3: 85101-87858 Arabidopsis thaliana
AT3G01280 0.5kb upstream 0.5kb upstream 500 false Chr3: 85101-85600 Arabidopsis thaliana
AT3G01280 0.5kb downstream 0.5kb downstream 2758 true Chr3: 85601-88358 Arabidopsis thaliana
AT3G01280 0.5kb downstream 0.5kb downstream 500 false Chr3: 87859-88358 Arabidopsis thaliana
AT3G01280 1.0kb upstream 1.0kb upstream 3258 true Chr3: 84601-87858 Arabidopsis thaliana
AT3G01280 1.0kb upstream 1.0kb upstream 1000 false Chr3: 84601-85600 Arabidopsis thaliana
AT3G01280 1.0kb downstream 1.0kb downstream 3258 true Chr3: 85601-88858 Arabidopsis thaliana
AT3G01280 1.0kb downstream 1.0kb downstream 1000 false Chr3: 87859-88858 Arabidopsis thaliana
AT3G01280 2.0kb upstream 2.0kb upstream 4258 true Chr3: 83601-87858 Arabidopsis thaliana
AT3G01280 2.0kb upstream 2.0kb upstream 2000 false Chr3: 83601-85600 Arabidopsis thaliana
AT3G01280 2.0kb downstream 2.0kb downstream 4258 true Chr3: 85601-89858 Arabidopsis thaliana
AT3G01280 2.0kb downstream 2.0kb downstream 2000 false Chr3: 87859-89858 Arabidopsis thaliana
AT3G01280 5.0kb upstream 5.0kb upstream 7258 true Chr3: 80601-87858 Arabidopsis thaliana
AT3G01280 5.0kb upstream 5.0kb upstream 5000 false Chr3: 80601-85600 Arabidopsis thaliana
AT3G01280 5.0kb downstream 5.0kb downstream 7258 true Chr3: 85601-92858 Arabidopsis thaliana
AT3G01280 5.0kb downstream 5.0kb downstream 5000 false Chr3: 87859-92858 Arabidopsis thaliana
AT3G01280 10.0kb upstream 10.0kb upstream 12258 true Chr3: 75601-87858 Arabidopsis thaliana
AT3G01280 10.0kb upstream 10.0kb upstream 10000 false Chr3: 75601-85600 Arabidopsis thaliana
AT3G01280 10.0kb downstream 10.0kb downstream 12258 true Chr3: 85601-97858 Arabidopsis thaliana
AT3G01280 10.0kb downstream 10.0kb downstream 10000 false Chr3: 87859-97858 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376933 5261 Brassicaceae View MSA
123832049 5264 Brassicales-Malvales View MSA
124350372 5266 SBM View MSA
124243906 5268 Malvidae View MSA
124071334 5270 Rosid View MSA
123743452 5271 Pentapetalae View MSA
122795321 5272 Eudicot View MSA
122042398 5273 Angiosperm View MSA
121349603 5274 Embryophyte View MSA
123426124 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 71.398     High  
cufflinks 86.098     High  
cufflinks 70.341     High Low
cufflinks 102.13     High High
cufflinks 78.687     High  
cufflinks 99.438     High High

0 Strain